Table 3.
Sequence Assembly Results
|
Total sequences analyzed |
237,954 |
| Number of contigs | 26,803 |
| Number of singletons | 16,338 |
| Number of sugarcane assembled sequences (SAS) | 43,141 |
| Number of assembled sequences matching known genes | 27,833 |
| Number of clones with full-length inserts
|
14,409
|
-
High-quality ESTs were assembled using CAP3. A BLASTX match cutoff of ≤10—5 was used to assign similarity. Clones were considered as having a putative full-length insert when their sequences started within the first 15 amino acids of their best BLASTX match with an E = value ≤10—40.
