Toward a Functional Annotation of the Human Genome Using Artificial Transcription Factors

Table 1.

Coregulated Gene Groups With Functional Relationships


EST ID

Gene name

Putative functional relationship
AI363200 proenkephalin Proenkephalin binds to G protein-coupled opioid receptors (Mansour et al. 1995). GAIP
AI363445 G α interacting protein (GAIP) is a regulator of G protein signaling (Berman et al. 1996).
AA464856 inhibitor of DNA binding 4 ID4 is known to induce apoptosis (Andres-Barquin et al. 1999). Caspase 5 is an
W60703 caspase 5 apoptosis-related cystein protease (Krippner-Heidenreich et al. 2001).
AI126424 E2F-like protein E2F-1 (Li and Baserga 1996) and Eps1 5R (Klapisz et al. 2002) are at the downstream of
AI92302 eps1 5R EGF signaling.
AI055825 Low-affinity IgE Fc receptor Fish odors or fumes cause allergic reaction through IgE-mediated hypersensitivity
AI251747 odorant-binding protein 2B (Crespo et al. 1995).
AA054073 CEACAM6 CEA/CEACAM6 and matrix metalloproteinases inhibit anoikis and enhance cell invasion
AA143331 matrix metalloproteinase 1 (Ordonez et al. 2000; Koul et al. 2001).
AI949576 annexin A3 Might be at common downstream of TGF-beta or glucocorticoid signaling. See text for
AI969825 tumor antigen se20-4 details.
AI971049 myocilin
AA422058 methyltransferase-like 1 DNA methylation inactivates metastasis suppressor genes (Lou et al. 1999). NM23B is
AA496628 nonmetastatic cells 2, protein (NM23B) found in reduced amount in tumor cells of high metastatic potential (Steeg et al. 1988)
AA398883 squamous cell carcinoma antigen 1 Cytokeratin 19 is a squamous cell carcinoma marker (Schneider et al. 2002). Therefore,
AA431080
keratin, type II cytoskeletal 6A
both gene products might be markers of squamous cell carcinoma.

This Article

  1. Genome Res. 13: 2708-2716

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