Does Recombination Shape the Distribution and Evolution of Tandemly Arrayed Genes (TAGs) in the Arabidopsis thaliana Genome?

Table 3.

Correlations Between TAG Density and Recombination Rates Estimated by Both the Local and Global Approaches



Local estimates


All data
Excluding telomere and centromere
Global estimates
Chromosome
ra
Pb
r
P
r
P
Data 10–10/1
   1 0.38 0.11 0.70 0.02 0.54 0.05
   2 0.59 0.03 0.53 0.09 0.70 0.01
   3 0.80 0.01 0.90 0.01 0.01 0.48
   4 –0.32 0.85 –0.30 0.79 –0.21 0.71
   5 –0.09 0.61 0.01 0.47 –0.25 0.75
   All 0.37 0.003 0.40 0.002 0.10 0.24
Data 10–30/0
   1 0.30 0.18 0.51 0.09 0.58 0.03
   2 0.59 0.03 0.49 0.11 0.62 0.03
   3 0.77 <0.01 0.91 0.01 0.07 0.41
   4 –0.38 0.89 –0.41 0.87 –0.09 0.58
   5 0.01 0.47 –0.08 0.58 –0.35 0.84
   All
0.37
0.002
0.34
0.01
0.12
0.20
  • Significant results are shown in bold.

  • a Pearson correlation coefficient between TAG density and recombination rate estimates

  • b All P values calculated by 10,000 bootstrap resamplings

This Article

  1. Genome Res. 13: 2533-2540

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