In Silico Atomic Tracing by Substrate-Product Relationships in Escherichia coli Intermediary Metabolism

Table 4.

Most Frequently Transforming Metabolism in the Reference Metabolism (High-Degree Nodes in the Metabolic Graph)


Compound Map size

Degree (rank)
0<
1<
2<
CO2 99 0 0
SAM 77 7 (73) 7 (69)
Acetyl-CoA 56 56 (1) 16 (14)
Pyruvate 47 45 (3) 37 (2)
CoA 46 46 (2) 46 (1)
d-Glucose 34 34 (4) 34 (3)
Acetate 30 30 (5) 0
UDP-d-glucose 25 25 (6) 25 (4)
Malonyl-CoA 25 22 (7) 14 (18)
ATP 21 21 (8) 21 (5)
l-Glu 20 19 (10) 19 (7)
AMP 20 20 (9) 20 (6)
UDP Gal 18 18 (11) 18 (8)
Succinyl-CoA 18 17 (12) 17 (9)
l-Asp 18 16 (14) 16 (12)
l-Lysine 17 16 (14) 16 (12)
Glycine 17 16 (14) 13 (22)
Gal 17 17 (12) 17 (9)
OAA 16 13 (27) 13 (22)
Formate
16
0
0
  • The numbers in parentheses indicate the ranking of metabolites.

This Article

  1. Genome Res. 13: 2455-2466

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