In Silico Atomic Tracing by Substrate-Product Relationships in Escherichia coli Intermediary Metabolism

Table 1.

List of Acronyms for Compounds


Acronym

Compound
ATP Adenosine 5′-triphosphate
ADP Adenosine 5′-diphosphate
AMP Adenosine 5′-monophosphate
CO2 Carbon dioxide
CoA Coenzyme A
Gal d-Galactose
DNA Deoxyribonucleic acid
Ery4P d-Erythrose 4-phosphate
Fru16BP d-Fructose 1,6-bisphosphate
Fru6P d-Fructose 6-phosphate
GA3P d-Glyceraldehyde 3-phosphate
Gly2P d-Glycerate 2-phosphate
Gly3P d-Glycerate 3-phosphate
KetoGlu alpha-keto-glutarate
l-Ala l-Alanine
l-Asp l-Aspartate
l-Glu l-Glutamate
NAD+/NADH Nicotinamide adenine dinucleotide
NADP+/NADPH Nicotinamide adenine dinucleotide phosphate
NH3 Ammonia
O2 Oxygen
OAA Oxaloacetate
PEP Phosphoenol pyruvate
Pi Orthophosphate
PPi Pyrophosphate
Rib5P d-Ribose 5-phosphate
SAM s-Adenosyl-l-methionine
SAH s-Adenosyl-l-homocysteine
Sed7P d-Sedoheptulose 7-phosphate
UDP Uridine 5′-diphosphate
Xyl5P
d-Xylulose 5-phosphate

This Article

  1. Genome Res. 13: 2455-2466

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