Table 1.
Comparison of Microarray Expression With Previous Reports in Literature
|
Condition |
|
Number of genes compared |
Fraction of genes consistent with literature |
|---|---|---|---|
| Heat | As reported in literature | 19 | 0.86 |
| Shock | Different from literature | 3 | 0.14 |
| Total | 22 | ||
| Stationary | As reported in literature | 51 | 0.69 |
| Phase | Different from literature | 23 | 0.31 |
| Total | 74 | ||
| Anaerobic growth | As reported in literature | 66 | 0.88 |
| Different from literature | 9 | 0.12 | |
| Total | 75 | ||
| Minimal | As reported in literature | 103 | 0.88 |
| Medium | Different from literature | 14 | 0.12 |
|
|
Total
|
117
|
|
-
Literature search of genes induced or repressed in each condition were compared with expression-discretized values. Consistency ranges from 88% to 69% in the four conditions tested. The complete set of compared genes can be found in Table 1-4S of Supplemental material.
