Table 2A.
Top 50 Tags Expressed at 25°C for Strain H99
| SAGE tag | Frequency (30,181 total) | % Abundance | Prelimary gene designation | E-value of BLASTx | Accession no.of BLASTx |
| ttcagcaggc | 430 | 1.42% | Zinc transport protein | 7.00E-15 | Saccharomyces cerevisiae Z72777 |
| ctcagcgatg | 352 | 1.17% | NO HIT | ||
| cattcgcata | 309 | 1.02% | NO HIT | ||
| cgacagaccg | 222 | 0.74% | Translation elongation factor 1α | 0.00E + 00 | Cryptococcus neoformans U81804 |
| aaaaaaaaaa | 211 | 0.70% | NO HIT | ||
| atatgacata | 210 | 0.70% | NO HIT | ||
| gccaacgccg | 203 | 0.67% | Cyclophilin A | 2E-72 | C. neoformans U81804 |
| gctctccagg | 171 | 0.57% | NO HIT | ||
| catctgttcc | 171 | 0.57% | NO HIT | ||
| cgcggaaagg | 162 | 0.54% | NO HIT | ||
| tagcgatcac | 153 | 0.51% | NO HIT | ||
| tagccgcgaa | 153 | 0.51% | NO HIT | ||
| ataagctttc | 148 | 0.49% | Mannitol 1-phosphate dehydrogenase | 3.00E-18 | C. neoformans AF175685 |
| gtttccgctg | 147 | 0.49% | NO HIT | ||
| ttcggcaagg | 132 | 0.44% | ADP, ATP carrier protein | 1.40E-131 | Neurospora crassa X00363 |
| gtcggtggta | 130 | 0.43% | ATP synthase β-chain | 8.00E-59 | Kluyveromyces lactis U37764 |
| gtggacacga | 129 | 0.43% | Nucleoside diphosphate-sugar hydrolase | 4.00E-26 | S. cerevisiae CAA85068 |
| aatgaatctt | 122 | 0.40% | NO HIT | ||
| tctggtcgag | 121 | 0.40% | Histone H4 | 2.90E-36 | Agaris bisporus P35058 |
| tcagaagttg | 121 | 0.40% | Thioredoxin | 9.00E-25 | Coprinus comatus AJ242791 |
| agcgagcact | 120 | 0.40% | NO HIT | ||
| gtattgaccc | 113 | 0.37% | Hypothetical protein | 4E-69 | Streptomyces coelicolor AL132991 |
| atgatcgggc | 108 | 0.36% | NO HIT | ||
| aaaaacgcgt | 107 | 0.35% | Myo-inositol-1-phosphate synthase | 1.00E-66 | Drosophila melanogaster AF071103 |
| catcactctt | 103 | 0.34% | Pyruvate decarboxylase | 8.0E-34 | Saccharomyces kluyveri AF193853 |
| ccgcgaccgt | 98 | 0.32% | NO HIT | ||
| gctgcctaca | 93 | 0.31% | ATP synthase—γ-chain | 5.00E-21 | N. crassa AL355930 |
| acggtggcaa | 92 | 0.30% | NO HIT | ||
| acacgtctgg | 91 | 0.30% | NO HIT | ||
| ggttacgccg | 91 | 0.30% | Malate dehydrogenase | 2.00E-35 | S. cerevisiae J02841 |
| gcgttctcgg | 86 | 0.28% | Transaldolase | 1.00E-102 | Schizosaccharomyces pombe AL023518 |
| actcaggttg | 83 | 0.28% | Fructose 1,6-bisphosphate aldolase | 2.00E-46 | N. crassa L42380 |
| gaatagtggg | 81 | 0.27% | NO HIT | ||
| ggccgacctg | 80 | 0.27% | 60S ribosomal protein RPL11 | 3.00E-81 | S. pombe Z69240 |
| atgcatttcg | 80 | 0.27% | NO HIT | ||
| gctcgcgacg | 77 | 0.26% | 60S ribosomal protein RPL2 | 1.00E-103 | Xenopus laevis U00920 |
| atatgtatcg | 75 | 0.25% | NO HIT | ||
| aacgtctgcc | 74 | 0.25% | NO HIT | ||
| accgtcgttg | 74 | 0.25% | NO HIT | ||
| tgcaaacgcg | 74 | 0.25% | Peroxisomal membrane protein | 6.00E-12 | S. pombe AJ002536 |
| gcgccgctta | 72 | 0.24% | NO HIT | ||
| aagcgcatttt | 71 | 0.24% | NO HIT | ||
| tagtgtcccg | 70 | 0.23% | NO HIT | ||
| aagggtggtg | 68 | 0.23% | NO HIT | ||
| aagcctgacg | 67 | 0.22% | NO HIT | ||
| aaatggtttg | 66 | 0.22% | NO HIT | ||
| catcacgctt | 64 | 0.21% | 60s ribosomal protein RPL5 | 3.00E-26 | S. pombe AL031528 |
| agcaaggagg | 63 | 0.21% | NO HIT | ||
| taacgcataa | 63 | 0.21% | NO HIT | ||
| agcaaggagg | 63 | 0.21% | NO HIT |
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↵Serial analysis of gene expression (SAGE) tag does not have an associated expressed sequence tag (EST) athttp://www.genome.ou.edu/cneo.html.
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↵Identified EST does not have a significant BLASTx result at http://www.ncbi.nlm.nih.gov/.
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↵BLASTx results for a contig identified athttp://mgm.duke.edu.
