Table 3.
Domains With Significant Tests With M3 and M8 After Bonferroni Correction
| Group | Domain | n | L | P-Value M0:M1 | P-value M7:M8 | ω | Positively selected sites |
| 2 | LRR | 6 | 222 | 4.5e-5 | <1.0e-6 | 5.73 | 599 S 607 L 621 F 664 T 667 G 669 E 686 M 688 Y 690 S 691 G 693 I 709 E 714 N 730 R 754 F 756 Q 774 H 776 D 779 N 796 V 797 S 818 T |
| 7 | LRR | 9 | 351 | 0.03 | <1.0e-6 | 2.43 | 664 C 676 H 687 R 690 E 710 S 711 N 713 T 723 Q 734 E 735 R 737 E 753 C 757 N 774 E 776 Y 778 S 779 E 845 F 847 S 869 N 871 A 872 R 890 Q 894 S 911 S 916 G 938 I 958 T 969 H 974 T 977 S |
| 8 | NBS | 4 | 252 | 0.64 | 7.1e-3 | 2.71 | 405 A 406 N |
| 9 | LRR | 4 | 212 | 0.12 | 5.5e-3 | 3.93 | 474 R |
| 10 | LRR | 6 | 246 | 0.42 | <1.0e-6 | 4.02 | 553 K 577 S 599 V 672 F 722 G 760 G 761 Q 781 D 784 F 843 E |
| 11 | LRR | 4 | 306 | 0.43 | <1.0e-6 | 15.42 | 580 Y 586 K 599 F 604 N 606 S 626 T 629 D 645 L 647 R 667 Q 673 A 676 V 695 C 716 S 717 S 719 R 721 E 738 E 743 R 758 E 760 M 779 V 781 L 783 E 817 N 833 V 836 T 838 D 840 S 841 N 857 K |
| 14 | CC-NBS | 10 | 435 | 0.03 | 4.6e-3 | 1.91 | 108 V |
| 15 | LRR | 3 | 284 | 0.11 | 7.5e-4 | 4.66 | 581 W 640 E 699 M 729 P 759 S 797 L 798 S |
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↵Number of sequences per group.
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↵Length without gaps.
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↵ P-values in bold are these that remained significant after Bonferroni correction for the total number of tests.
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↵Positions are described by using the amino acid of the first sequence in the alignment and its corresponding position considering gaps; underlined positions are those common to the results of the analyses of the complete and domain alignments.
