Table 1.
Proteins With a Known Function in Splicing and RNA Processing
| Acc. no. | Name |
| snRNP core proteins | |
| SWISS-PROT:Q15357 | Sm G |
| SWISS-PROT:Q15356 | Sm F |
| SWISS-PROT: P08578 | Sm E |
| SWISS-PROT:P13641 | Sm D1 |
| SWISS-PROT: P43330 | Sm D2 |
| SWISS-PROT:P43331 | Sm D3 |
| SWISS-PROT:P14678 | Sm B/B′ |
| U1 snRNP | |
| SWISS-PROT: P09234 | U1 snRNP C |
| SWISS-PROT:P09012 | U1 snRNP A |
| SWISS-PROT:P08621 | U1 snRNP 70 kDa |
| U2 snRNP | |
| SWISS-PROT: Q15427 | SAP 49 |
| SWISS-PROT:Q12874 | SAP 61 |
| SWISS-PROT: Q15428 | SAP 62 |
| SWISS-PROT:Q15459 | SAP 114 |
| SWISS-PROT: Q15393 | SAP 130 |
| SWISS-PROT:Q13435 | SAP 145 |
| SWISS-PROT: O75533 | SAP 155 |
| SWISS-PROT:Q01081 | U2AF 35 kDa |
| SWISS-PROT:P26368 | U2AF 65 kDa |
| SWISS-PROT:P09661 | U2 snRNP A′ |
| SWISS-PROT:P08579 | U2 snRNP B″ |
| U5 snRNP | |
| ENSP00000263694 | U5 snRNP 40 kDa |
| ENSP00000261905 | U5 snRNP 100 kDa |
| ENSP00000266079 | U5 snRNP 102 kDa |
| SWISS-PROT:Q15029 | U5 snRNP 116 kDa |
| SWISS-PROT:O75643 | U5 snRNP 200 kDa |
| ENSP00000254706 | U5 snRNP 220 kDa |
| U6 snRNP | |
| SWISS-PROT: Q9Y333 | LSm2 |
| SWISS-PROT: Q9Y4Z1 | LSm3 |
| SWISS-PROT: Q9Y4Z0 | LSm4 |
| SWISS-PROT: Q9Y4Y8 | LSm6 |
| SWISS-PROT: Q9UK45 | LSm7 |
| SWISS-PROT:O95777 | LSm8 |
| U4/U6 snRNP | |
| ENSP00000259401 | U4/U6 snRNP hPrp4 |
| ENSP00000236015 | U4/U6 snRNP hPrp3 |
| ENSP00000291763 | U4/U6 snRNP 61 kDa |
| U4/U6.U5 snRNP | |
| SWISS-PROT: P55769 | U4/U6.snRNP 15.5 kDa |
| ENSP00000263858 | U4/U6.U5 snRNP 65 kDa |
| ENSP00000256313 | SART-1 = U4/U6.U5 snRNP 110 kDa |
| SR proteins | |
| SWISS-PROT:Q07955 | SF2 |
| SWISS-PROT: Q16629 | 9G8 |
| SWISS-PROT:Q01130 | SC35 |
| SWISS-PROT: P23152 | SRp20 |
| SWISS-PROT:Q13242 | SRp30C |
| SWISS-PROT: Q05519 | SRp54 |
| SWISS-PROT:Q13247 | SRp55 |
| TREMBL: Q8WXA9 | Splicing factor, arginine/serine-rich 12 |
| ENSP00000255590 | Ser/Arg-related nuclear matrix protein |
| Other splicing factors | |
| ENSP00000227503 | SF1 |
| ENSP00000235397 | SPF27 |
| ENSP00000239010 | SPF30 |
| ENSP00000263697 | SPF31 |
| TREMBL:O75939; Q96GY6 | SPF45 |
| ENSP00000265414 | CDC5-related protein |
| SWISS-PROT: Q13573 | SKIP |
| TREMBL: Q9NZA0 | PUF60 |
| TREMBL: O43660 | Pleiotropic regulator 1 |
| ENSP00000253363 | CC1.3 |
| ENSP00000296702 | CA150 |
| SWISS-PROT:Q14562 | DEAH-box protein 8 |
| SWISS-PROT:O43143 | DEAD/H-box-15 |
| SWISS-PROT:O60231 | DEAD/H-box-16 |
| ENSP00000268482 | hPRP16 |
| SWISS-PROT:O60508 | hPRP17 |
| ENSP00000198939 (+ENSP00000248044) | ERPROT 213-21 (+N-terminal extension of ERPROT) |
| ENSP00000290341 | IGF-II mRNA-binding protein 1 |
| SWISS-PROT: P23246 | PTB-associated splicing factor |
| ENSP00000266611 | IK factor |
| ENSP00000257528 | SLU7 |
| ENSP00000216727 | poly(A)-binding protein II |
| ENSP00000293531 | KH-type splicing regulatory protein |
| ENSP00000294623 | far upstream element-binding protein 1 |
| ENSP00000227524 | nuclear matrix protein NMP200 |
| TREMBL: Q96HB0 | HCNP protein |
| ENSP00000278799 | crooked neck-like 1 |
| SWISS-PROT: Q9Y3B4 | pre-mRNA branch site protein p14 |
| ENSP00000292123 | scaffold attachment factor B |
| ENSP00000261167 | SH3 domain-binding protein SNP70 |
| hnRNP | |
| ENSP00000257767 | GRY-RBP |
| SWISS-PROT:Q13151 | hnRNP A0 |
| SWISS-PROT: P09651 | hnRNP A1 |
| SWISS-PROT:P22626 | hnRNP A2/hnRNP B1 |
| ENSP00000298069 | hnRNP A3 |
| ENSP00000261952 | hnRNP AB, isoform a |
| SWISS-PROT:P07910 | hnRNP C |
| SWISS-PROT: Q14103 | hnRNP D |
| ENSP00000295469 | hnRNP D-like |
| SWISS-PROT: P52597 | hnRNP F |
| SWISS-PROT: P38159 | hnRNP G |
| SWISS-PROT: P31943 | hnRNP H |
| ENSP00000265866 | hnRNP H3 |
| SWISS-PROT:P26599 | Polypyrimidine tract-binding protein; hnRNP I |
| ENSP00000297818 | hnRNP K |
| SWISS-PROT: P14866 | hnRNP L |
| SWISS-PROT: P52272 | hnRNP M |
| SWISS-PROT: O43390 | hnRNP R |
| Q00839 | hnRNP U |
| TREMBL:O76022 | E1B-55kDa-associated protein 5 |
| RNA processing | |
| SWISS-PROT: P52298 | CBP 20 kDa |
| SWISS-PROT:Q09161 | CBP 80 kDa |
| SWISS-PROT: P17844 | DEAD/H-box-5; RNA helicase p68 |
| SWISS-PROT: P35637 | RNA-binding protein FUS |
| SWISS-PROT: Q01844 | RNA-binding protein EWS |
| SWISS-PROT:Q12906 | Interleukin enhancer-binding factor 3 |
| ENSP00000270794 | TLS-associated serine-arginine protein 2 |
| RNA processing | |
| ENSP00000269407 | Aly |
| SWISS-PROT: Q9UBU9 | Tap |
| ENSP00000261600 | hHpr1 |
| SWISS-PROT: Q08211 | RNA helicase A |
| ENSP00000264073 | ELAV-like protein 1 (Hu-antigen R) |
| SWISS-PROT: P43243 | matrin 3 |
| SWISS-PROT:P55265 | Double-stranded RNA-specific adenosine deaminase (DRADA) |
| ENSP00000300291 | CPSF 25 kDa |
| ENSP00000292476 | CPSF 30 kDa |
| ENSP00000266679 | similar to CPSF 68 kDa |
| SWISS-PROT: Q9UKF6 | CPSF 73 kDa |
| SWISS-PROT: Q9P2I0 | CPSF 100 kDa |
| SWISS-PROT: Q10570 | CPSF 160 kDa |
| ENSP00000227158 | cleavage stimulation factor subunit 3 |
| SWISS-PROT: P05455 | Lupus La protein: Sjogren syndrome type B antigen |
| SWISS-PROT: Q06265 | Polymyositis/scleroderma autoantigen 1 |
| SWISS-PROT: Q01780 | Polymyositis/scleroderma autoantigen 2 |
| SWISS-PROT: Q9Y2L1 | Exosome complex exonuclease RRP44 |
| SWISS-PROT: Q9NPD3 | Exosome complex exonuclease RRP41 |
| ENSP00000262489 | Dhm1-like protein |
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↵SWISS-PROT or ENSEMBL accession numbers are given athttp://srs.embl-heidelberg.de:8000/srs5/ and http://www.ensembl.org.
