B-ZIP Proteins Encoded by the Drosophila Genome: Evaluation of Potential Dimerization Partners

Table 1.

Closest Human Counterpart to DrosophilaB-ZIP Proteins

DrosophilaSequence db designation Synonyms Mammalian Sequence (human, mouse) % identity
basic region zipper (L1-L5) g-a-d-e positions
CG7786 gi7302966 DBP (gi1706312#,gi8393240) 64 48 70
CG17888a gi7295189 Pdp1, Par-domain protein 1 HLF (gi4504421#,gi8394435) 88 43 60
CG3136* gi7302252 ATF6 (gi3953531,gi8393190) 76 26 40
CG4575 gi7290774 HLF (gi4504421#,gi8394435) 76 23 40
CrebB17-A gi7293451 CREB, dCREB2, CG6103 CREM (gi8393194,gi479997) 92 75 81
CG8669 gi7298780 crc ATF-4 (gi14779030,gi6753128) 68 34 40
crebA gi7294270 dCREB-A, CG7450 Oasis (gi14211949,gi6754918) 76 37 55
CG12850 gi7291864 ATF-4 (gi14779030,gi6753128) 44 26 30
CG9954* gi7302350 MAFF (gi7513139,gi2696885) 76 26 35
gt gi7290320 giant, CG7952 HLF (gi4504421#,gi8394435) 84 26 45
slbo/CEBP gi7291773 DmC/EBP, slow border cells, CG4354 C/EBP+D55 β & α (gi4885131, gi109606) 76 23 30
CG10034* gi7298587 MAF (gi4885447#,gi1708910) 72 37 35
CG13624 gi7301182 HYPOTHETICAL (gi18559858) 92 34 35
vri gi7296965 vrilie, CG14029 NFIL-3 (gi4885517#,gi8393832) 80 31 23
CG9415 gi7291250 XBP (gi105867,gi7305633) 76 17 30
CG17836 gi7300452 none na na na
CG18619* gi7297639 CRE-BP-like 2 (gi4503035) 100 40 50
CG15479 gi7298028 none na na na
sisA gi7292623 CG1641 none na na na
CG14014 gi7296993 none na na na
CG16813 gi7298025 none na na na
CG16815 gi7298026 none na na na
Jra* gi7303798 Djun, Jun-related antigen, CG2275 JUND (gi18590942#,gi6680512) 84 49 60
CG6272* gi7294768 C/EBP (gi4885129#,gi6680916) 36 28 30
A3-3 gi7290135 CG11405 ATF3 (gi226728,gi13562096) 72 45 65
cnc* gi7300970 CNC_DROME, CG4578 NFE2 (gi5453774,gi6754834) 80 14 20
kay gi7301826 D-Fos, Fos-related antigen, Fra,  CG15509 FOS (gi4885241#,gi6753894) 60 37 55
  • List of 27 Drosophila B-ZIP proteins in the same order as presented in Figure 3. The first column contains theDrosophila sequence identifier, using either the literature name or the Celera CG name. An asterix is used to identify proteins that have homology with the human proteins listed in column four outside of the B-ZIP region. The second column contains the GenBank Identification (gi) number. The third column contains any synonyms for the Drosophila name. The fourth column lists human and mouse sequences with the most similarity to the Drosophila B-ZIP domain. The human counterpart is listed first and underlined. A pound sign (#) is used to indicate the existence of a mouse sequence that is a precise match with the human sequence listed, although it is not necessarily the sequence listed as the closest mouse counterpart of theDrosophila sequence. The human sequences were used to calculate the % identity figures in columns 5–7 of this table and were also used in the phylogenetic tree analysis. The fifth, sixth and seventh columns contain the percent identity between the basic domain, the zipper motif and g, a, d and e positions of the zipper. None designates the absence of any human or mouse relative in the database.

This Article

  1. Genome Res. 12: 1190-1200

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