Predicting Protein Cellular Localization Using a Domain Projection Method

Table 1.

Domains Predicted to Be Strongly Multilocale, with a Probability >0.33 in Two Compartments

Cytoplasmic/Nuclear
Pc Pn Ps
REC 0.53 0.46 0
HDc 0.56 0.38 0.04
GAF 0.58 0.41 0
G-alpha 0.61 0.38 0
UBCc 0.62 0.37 0
ZnF_UBP 0.40 0.59 0
AAA 0.40 0.59 0
AT_hook 0.52 0.47 0
TOP4c 0.59 0.40 0
TOP2c 0.60 0.39 0
SMR 0.64 0.35 0
KRAB 0.33 0.66 0
LER 0.35 0.64 0
ZnF_U1 0.37 0.62 0
SANT 0.39 0.60 0
ZnF_NFX 0.40 0.59 0
RRM 0.56 0.43 0
CUE 0.58 0.41 0
PolyA 0.33 0.66 0
R3H 0.36 0.64 0
ZnF_TAZ 0.36 0.63 0
LON 0.36 0.63 0
CLH 0.37 0.62 0
GEL 0.42 0.57 0
TUDOR 0.43 0.56 0
ZnF_UBR1 0.46 0.63 0
KH 0.49 0.50 0
Cytoplasmic/Secreted
WSN 0.53 0.03 0.43
FN3 0.63 0 0.36
  • Pc, Pn, Ps are the probabilities each domain is respectively cytoplasmic, nuclear, or secreted.

This Article

  1. Genome Res. 12: 1168-1174

Preprint Server