Multiplex Three-Dimensional Brain Gene Expression Mapping in a Mouse Model of Parkinson's Disease

Table 1.

Coregulated Genes

Gene # Name/Unigene symbol Accession no. Function
1 Scyd1 AA272232 Small inducible cytokine subfamily D, 1
2 Siat9 AA185328 Sialyltransferase 9 (CMP-NeuAc:lactosylceramide  alpha-2,3-sialyltransferase)
3 EST AA268133 Novel
4 EST AA051564 Novel
5 Ptk2b AA162543 Protein tyrosine kinase 2 β
6 EST AA000180 Novel
7 EST AA119581 Novel
8 EST AA178003 Moderately similar to CGMP-dependent 3′,5′-cyclic  phosphodiesterase (Rattus norvegicus)
9 EST AA250443 Novel
10 EST AA049584 Novel
11 lap AA038556 Intraolsternal A particles
12 Bcl11b AA219828 B-Cell lymphoa/leukaemia 11B
13 EST AA163717 Highly similar to hypothetical protein KIAA0029  (H. sapiens)
14 Hivep2 AA277071 Human immunodeficiency virus type I enhancer-binding protein 2
15 Cspg5 AA016861 Chondroitin sulfate proteoglycan 5
16 Cugbp2 AA177976 CUG triplet repeat, RNA-binding protein 2
17 Capn12 AA403949 Calpain 12
18 6130400C22Rik AA110791 RIKEN cDNA 6130400C22 gene product
19 EST AA271272 Novel
20 1200017E07Rik AA458211 RIKEN cDNA 1200017E07 gene product
21 2810204M08Rik AA031140 AIKEN cDNA 2610204M08 gene product
22 EST AA030405 Novel
23 EST AA154129 Weakly similar to T43459 hypothetical protein  DKFZp434F0721.1 (Homo sapiens)
24 EST AI452297 Novel
25 EST AA008591 Novel
26 EST AA016374 Highly similar to α-2-macroglobulin precursor  (Raltus norvegicus)
27 EST AA217217 Novel
28 3632451O06Rik AA261708 RIKEN cDNA 3632451O06 gene product
29 5031422I09Rik AI587794 RIKEN cDNA 5031422I09 gene product
30 2610024A01Rik AA285896 RIKEN cDNA 2610024A01 gene
31 2010012F07Rik AA277366 RIKEN cDNA 2010012F07 gene product
32 Cbln1 AA016422 Cerebellin 1 precursor protein
33 Etohi6 AA185218 Ethanol induced 6
34 EST AA185648 Novel
35 EST AA168416 Novel
36 9430010M12Rik AA270916 RIKEN cDNA 9430010M12 gene product
37 Usp9x AA178383 Ubiquitin-specific protease 9, X chromosome
38 Rnf13 AA189865 Ring finger protein 13
39 Nfl AI385738 Neurofilament, light polypeptide
40 Sepp1 AA278440 Selenoprotein P, plasma, 1
41 Enpp2 AA177363 Ectonucleotide pyrophosphataea/phosphodiesterase 2
42 Clptm1 AA120831 Cleft lip and palate associated transmembrane protein 1
43 EST AA544722 Novel
44 2700055K07Rik AA498788 RIKEN cDNA 2700055K07 gene product
45 Pla2g7 AA073983 Phospholipase A2 group VII (platelet-activating factor  acetylhydrolase, plasma)
46 Abca2 AA451270 ATP-binding cassette, subfamily A (ABC1), member 2
47 Crys2 AA231358 Crystallin, α B
48 Mbc2 AA123008 Membrane-bound C2-domain-containing protein
49 EST AA049361 Novel
50 Nfl AA253725 Neurofilament, light polypeptide
51 Sept4 AA498275 Septin 4
52 Pkaca AA051526 Protein kinase, cAMP dependent, catalytic, α
53 Mbp AA059540 Myelin basic protein
54 EST AA498757 Novel
55 EST W87059 Novel

This Article

  1. Published in Advance May 16, 2002, doi: 10.1101/gr.229002 Genome Res. 12: 868-884

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