Comparative Analysis of Chloroplast Genomes: Functional Annotation, Genome-Based Phylogeny, and Deduced Evolutionary Patterns

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Figure 3.
Figure 3.

Phylogenetic tree derived from the analysis of the X-matrix of orthologs genes of 17 complete chloroplast genomes plusSynechocystis genome. (A) Tree in phylogram view. (B) A different tree obtained with the raw 286X-matrix obtained automatically but before manual editing (see Methods). (C) The same tree as in A, but in a rectangular cladogram, including close to each branch the percentage of stability according to bootstrapping analysis. (D) TheA tree in a radial view, including names of the main phylogenetic groups corresponding to the species studied.

This Article

  1. Genome Res. 12: 567-583

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