Exploration of Novel Motifs Derived from Mouse cDNA Sequences

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Figure 3.
Figure 3.

(A) Multiple sequence alignment of AGPAT3 and AGPAT4 specific motif MDS00145. The SWISS-PROT/TrEMBL accessions of the sequences are as follows: (HSA)AGPAT3 [isoform 1], Q9NRZ7; (HSA)MGC16906, AAH11971; (HSA)AGPAT3 [isoform 2], Q9NRZ701; (MMU)Agpat3, Q9D517; (MMU)Agpat4, Q9DB84; (RNO)Agpat4, BAB62290; and (HSA)AGPAT4, Q9NRZ5. The putative translations of Agpat3 variant 1 (clone ID 2210417G15) and variant 2 (clone ID 4831410M06) are derived from DDBJ entry AK008965 and FANTOM1 database because variant 2 has no DDBJ accession number. (B) Alignment of AGPAT3 and AGPAT4 C-terminal region with other AGPAT family members. The positions of the AGPAT3 and AGPAT4 specific motif MDS00145 are indicated by “+”. The multiple sequence alignment of the complete sequences is shown in Suppl. Fig. 2.

This Article

  1. Genome Res. 12: 367-378

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