Figure 1.
Workflow diagram. Flowchart for a hypothetical SNP discovery project, with two possible uses of viewGene. A genomic reference sequence for a region of interest is processed with several sequence analysis programs (RepeatMasker, miropeats,BLAST). viewGene is being used to visualize the unique sequence and neighboring genomic features. Target areas are sequenced in a number of DNA samples, and the resulting sequences are aligned to the reference sequence. viewGene is being used again to compare the cross match results to the BLAST and UCSC data already compiled.
