The Automatic Detection of Homologous Regions (ADHoRe) and Its Application to Microcolinearity Between Arabidopsis and Rice

Table 1.

Overview of the Rice Data Set Used

Chromosome Sequenced (%) Total data set Annotated genes Gene density Overlapping BACs Genes
MB BACs BACs MB
 1 100.0 50.68 370 10,300 4.92 266 34.97 6237
 2 44.7 18.40 154 3692 4.98 2 0.30 38
 4 92.4 18.90 143 3766 5.02 75 10.76 2064
 6 63.0 21.57 159 4410 4.89 6 0.94 163
 7 75.5 20.33 164 4149 4.90 7 0.86 168
 8 46.2 16.85 139 3398 4.96 24 3.55 615
10 95.6 19.28 145 3806 5.07 73 10.83 1892
Total 166.01 1274 33,521 4.95 453 62.00 11,177

This Article

  1. Genome Res. 12: 1792-1801

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