Mosaic Organization of Orthologous Sequences in Grass Genomes

Table 2.

Rice Homologous Genes of Nonconserved Genes Fromphp200725 Regions

Gene Map position Clone # GenBank # Description of homologous gene e-value
2 ch1: 20.2 cM BAC OJ1174_D05 AP003118 Hypothetical protein 1e-28
3 ch10: 72.6 cM OSJNBa0027P10 AC084763 Hypothetical protein 3e-50
4 ch10: 58.9 cM OSJNBb0018B10 AC051634 Putative transporter e-102
5 ch4: 122.9 cM OSJNBa0087O24 AL606646 Plastid division protein FtsZ 6e-68
9 ch10: 6.8 cM OSJNBa0036D19 AC087723 Putative senescence-associated protein 15 e-127
10 ch4: 111.0–111.3 cM OSJNBa0043L09 AL606444 Putative receptor kinase 9e-65
12 ch1: 98.5 cM PAC P0681B11 AP003022 Mla1-like disease-resistance gene 7e-116
14 CRa ch11: 30.5–32.1 cM OSJNBa0034O04 N/A Disease response gene N/A
16 CRb ch1: 26.8–28.4 cM PAC P0419B01 AP003244 Cytochrome P450-like protein 6e-40
17 ch1: 98.5 cM PAC P0681B11 AP003022 Mla1-like disease-resistance gene e-131
18 ch1: 98.5 cM PAC P0681B11 AP003022 Mla1-like disease-resistance gene e-154
19 ch1: 16.1–19.9 cM PAC P0013F10 AP002523 Putative glucosyl transferase 5e-75
20 ch1: 98.5 cM PAC P0681B11 AP003022 Mla1-like disease-resistance gene e-147

  • ↵Numbers correspond to those in Table 1.

  • ↵ e-value is based on nucleotide sequence level similarity.

  • ↵Information in this row comes from experimental data (see Methods).

This Article

  1. Published in Advance September 13, 2002, doi: 10.1101/gr.268302 Genome Res. 12: 1549-1555

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