Inferring Domain–Domain Interactions From Protein–Protein Interactions

Table 5.

Novel Predictions for APG17 Interactions With High Probability

Protein Localization Function (cellular role or biochemical)
APG17 authophagy, Vesicular transport
RPS0A Cytoplasmic Ribosomal protein, RNA-binding protein
RPS0B Cytoplasmic Ribosomal protein, RNA-binding protein
YBR197C unknown unknown
YPL077C unknown unknown
YAP7 Transcription factor (Pol II), leucine zipper family
CIN5 Nuclear Transcription factor (Pol II), leucine zipper family
YMR031C unknown unknown
YKL050C unknown unknown
YBR270C unknown unknown
YJL058C unknown unknown
YMR124W unknown unknown
PLO1 unknown unknown
PLO2 unknown unknown
SPO20 Plasma membrane sporulation
LAT1 Mitochondrial Carbohydrate metabolism, Energy generation
SEC9 Plasma membrane Vesicular transport (vesicle docking and secretion)
DOG1 Carbohydrate metabolism, Hydrolase
DOG2 Carbohydrate metabolism, Hydrolase
KGD2 Mitochondrial Carbohydrate metabolism, Energy generation, Oxidoreductase
  • The functional annotations are obtained from YPD.

This Article

  1. Genome Res. 12: 1540-1548

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