Table 5.
Study Set Results at Different P Values
| Quantile | Number of motif predictions | Motif predictions with avg MAP ≥ critical value | Correspondence with known sites for: | ||||
| Motif predictions with avg MAP ≥ critical value | Motif predictions with avg MAP < critical value | ||||||
| 80% (P = 0.20) | 163 | 129 | 93 | 19 | |||
| 90% (P = 0.10) | 163 | 108 | 81 | 31 | |||
| 95% (P = 0.05) | 163 | 85 | 64 | 48 | |||
| 99% (P = 0.01) | 163 | 50 | 37 | 75 | |||
-
↵Using orthologous data sets containingEscherichia coli–Salmonella typhi–Yersinia pestis–Vibrio cholerae–Haemophilus influenzae–Shewanella oneidensis–Pseudomonas aeruginosa and analyzing motif predictions that contain sites from at least two species.
