Table 1.
Sequence Features Within Clones Containing KIAA0187Paralog
| Clone (accession no.) | Paralog classification | Long tandem repeats in clones | % Tandem repeats | Known genes in clone(s) | Draft map position | FISH mapping |
| AC026273 | distal | Alpha Sat, CATTT, CAGGG | 31.4 | — | Not placed | 1cen, 2cen, 9p12, 9q12, 13cen, 16cen, 22cen |
| AC068279 | distal | GCTG, AluSx, CATTT, CAGGG | 21.2 | — | 2q13 | 1qcen, 2cen, 2q13, 9cen, 15q11, 16p11 |
| AC018696 | distal | AluSx,CAGC, Sat II, CATTT, CAGGG | 18.4 | — | 2p13 | n.d. |
| AC024573 | distal | CATTT, CAGGG, CAGC, AluSx | 13.2 | — | 2p11 | n.d. |
| AC016424 | distal | CAGGG, CATTT, Alpha Sat | 12.9 | — | 2p11 | 1cen,2cen, 7cen, 9p12, 9q12, 13nor, 14cen, 16p11, 22q11+nor cen |
| AC010098 | distal | CAGC, CATATT, AT complex,CAGGG | 10.7 | — | 2p11 | 1cen, 2cen,16cen |
| D87003/18 | distal | CAGGG, CATTT | 9.7 | — | 22q11 | n.d. |
| AC013411 | distal | CAGGG, CATTT | 6.2 | — | 1 unplaced | 1cen, 2cen, 13cen, 15cen, 16cen |
| AC018963 | distal | AluSx, CATTT, CAGGG | 4.7 | — | 15q11.2 | 1q11, 2cen, 9p12, 9q12, 16q11, 15q11 |
| AC036220 | distal | CAGGG, CATTT | 3.8 | — | 16p12.3 | 1cen, 2cen, 14cen, 16cen |
| AP000525/6 | distal/proximal | — | 0.8 | — | 22q11 | n.d. |
| AL450334 | proximal | — | 0.0 | — | Not present | 10q11,10q23 |
| AL391137 | proximal | — | 1.97 | Annexin A8 (Chr10: 69–72cM) | 10q11.2 | 2q23, 6q11, 8pter, 8q23,10q11, 12q22, 16pter |
| AC022400 | proximal | — | 0.44 | Heparan N-deacetylase (97–98cM) | 10q22.2 | 10q11,10q22 |
| AL135925 | proximal | — | 1.17 | Lung surfactant protein D Chr10: 98–107cM) | 10q22.3 | 10q11,10q23.1 |
| AL136982 | proximal | — | 0.57 | GLUDI (Chr10: 114–199cM) | 10q23.2 | 10q11, 10q23.3 |
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Paralog classification is based on exons present (see text for details). AluSx refers to a tandem array of up to 43Alu elements, mostly of the AluSg/x subfamily. The only tandem repeats in the proximal clones are di-, tri-, and tetranucleotide repeats. Genetic intervals defining gene positions were taken from Deloukas et al. (1998). Current map positions for each clone are derived from the UCSC sequence (December 2000 build, http://genome.ucsc.edu/ ).
