ARACHNE: A Whole-Genome Shotgun Assembler

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 11.
Figure 11.

Consistency of forward-reverse links. (A) The distanced(A,B) (length of gap or negated length of overlap) between two linked contigs A and B can be estimated using the forward-reverse linked reads between them. (B) The distanced(B,C) between two contigs B,C that are linked to the same contig A, can be estimated from their respective distances to the linked contig.

This Article

  1. Genome Res. 12: 177-189

Preprint Server