Toward High-Throughput Genotyping: Dynamic and Automatic Software for Manipulating Large-Scale Genotype Data Using Fluorescently Labeled Dinucleotide Markers

Table 3.

Example of a Statistical Report of Allele Binning (Marker D20S196)

Bin Start point End point BR ABD No. of alleles
1 265.04 266.07 1.03 310
2 268.18 268.18 2.78 1
3 271.1 271.315 0.21 3.05 8
4 272.92 273.33 0.41 1.89 14
5 276.05 276.05 2.93 1
6 277.63 278.185 0.56 1.79 87
7 278.74 278.81 0.07 0.92 3
8 279.63 279.74 0.11 0.92 2
9 280.615 281.37 0.76 1.15 46
10 282.49 282.81 0.32 1.80 11
11 283.39 283.625 0.23 0.87 27
12 284.3 285.87 1.57 1.57 112
13 286.38 286.82 0.44 1.47 93
14 287.32 287.35 0.03 0.79 3
15 288.285 288.79 0.50 1.18 228
16 290.255 290.8 0.54 1.93 241
17 292.205 292.56 0.36 1.91 54
18 294.14 294.43 0.29 1.88 7
19 296.105 296.34 0.24 1.97 6
  • BR, bin range; ABD, adjacent bin distance. See text for definitions. Boldface numbers are cited in the text as examples of genotype error detection during allele binning. The start point is the smallest value of fragment lengths of a bin; end point is the largest value.

This Article

  1. Genome Res. 11: 1304-1314

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