A Sequence-Based Integrated Map of Chromosome 22

Table 2.

Definition of Variables

Variable name Definition (kb/Mb unless otherwise stated)
L Ordinal location of 500-kb segment from q11.21
MD Male cM/Mb
FD Female cM/Mb
AD Sex average cM/Mb
GD Confirmed and predicted genes No./Mb
RD Centri-ray 3000 rads/Mb
CpG CpG island counts/Mb
GC G + C content
REP Length of tandem repeats (10–100bp element,  0.03–5 kb total size)
RAT Length of tandem repeats (10–100bp element,  0.03–5kb total size) >60% AT
RGC Length of tandem repeats (10–100bp element,  0.03–5 kb total size) >60% GC
SINE (Short Interspersed Nuclear Elements)  Length of ALUs + MIRs
LINE (Long Interspersed Nuclear Elements)  Length of LINE repeats
LTR (Long Terminal Repeats) Length of MaLRs,  Retrovires and Mer 4 group repeats
EL DNA elements Lengths of MER1 + MER2 +  Mariners repeats
SI Length of simple repeats

This Article

  1. Genome Res. 11: 1290-1295

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