High-Throughput Genotyping with Single Nucleotide Polymorphisms

Table 3.

Probes and Primers

SNP Probes Primers
eNOSE298D CCCCAGATGAGCCCCCAGAACT CGGTCGCTTCGACGTGCT
CCCCAGATGATCCCCCAGAACTC CCAGTCAATCCCTTTGGTGCT
CYP11B15 TCTCCCAGTACCCGCTCTGCCCA TACACAGCCTCAACCTGGCC
TCTCCCAGTACCGGCTCTGCCCA GGCCTGCATGTTTCCTGGA
WIAF2065 AACAAGCTTTCCACTCCCACTTCCCT CAAGCATTTGTCTTAATTTACAGACATTAA
ACAAGCTTTCCGCTCCCACTTCC GTGGATGAAGAGGTTGAGGTGATA
WIAF896 CCAAAATTCCGAGTCCCTTGGCT TCTGCCTATAGCTTGGATATCTTAATCTCT
CAGCCAAAATTCCTAGTCCCTTGGCT CTGAGAGGTTTTGGAATGACTTGAA
WIAF610 TCTGGGTATGTGACATGCCTGCTCC ACTCTGAATTATGGCAGTAGGCAAA
TGGGTATGTGACGTGCCTGCTCC CTTGAGAGAACTCATCATTTAAAAATGTGT
WIAF2042 TCTATCTCTAAGGGGAGTCTCAAAACCCCA TGAGCACATTTCTTGGGTCTGTT
TCTATCTCTAAGGGCAGTCTCAAAACCCCA
WIAF1161 CATTATGTGGACTGAACCGACTTTTCTAAAGC ATGAGCATTAGCTACTTTTCAGAATTGA
CATTATGTGGACTGAATCGACTTTTCTAAAGCT TGTTGCAAAAGGAAAGAAAAGCTT
C
WIAF2566 TGTGCATAGTATCCATTAGTTTTTCATGATCCA ACTCAGAAGGGTCATGGGTGA
TGTGCATAGTATCCAGTAGTTTTTCATGATCCA GCTTCTAGGGTATCCATCTCCCTAGTA
WIAF335 TGTTAACAATTTTGGGCAGCCGAACT GGATGTTGCATAAATTCAGGTTCTTT
TGTTAACAATTTTTGGCAGCCGAACTC ATGTGCGTTTGTAGACAGCATCA
  • Probes used in the TaqMan assay. The SNP is underlined.

  • Forward and reverse primers for each TaqMan assay, with the forward primer listed first. Sequences for the SNPs prefixed WIAF were obtained from the Whitehead Institute Web site (http://www-genome.wi.mit.edu).

This Article

  1. Genome Res. 11: 1262-1268

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