Conservation of Microstructure between a Sequenced Region of the Genome of Rice and Multiple Segments of the Genome of Arabidopsis thaliana

Table 2.

Functional Domains of Predicted Rice Proteins

Predicted gene Interpro domains
C15 IPR000104 Type I antifreeze protein
W50 IPR001687 ATP/GTP-binding site motif A (P-loop)
IPR000817 Prion protein
IPR002952 Eggshell protein
C90 IPR001472 Bipartite nuclear localization signal
IPR000104 Type I antifreeze protein
C200 IPR000535 Major sperm protein (MSP) domain
C202 IPR001857 Ribosomal protein L19
W230 IPR002965 Proline rich extensin
W265 IPR000694 Proline-rich region
W325 IPR001878 Zn-finger CCHC type
C345 IPR002965 Proline rich extensin
IPR001402 Probable G protein-coupled receptor GPR10
W455 IPR001687 ATP/GTP-binding site motif A (P-loop)
IPR002078 Sigma-54 factor interaction protein family
IPR001806 Ras family
W485 IPR000734 Lipase
W495 IPR001753 Enoyl-CoA hydratase/isomerase
W505 IPR001753 Enoyl-CoA hydratase/isomerase
W535 IPR002290 Serine/Threonine protein kinases active-site
IPR000379 Esterase/lipase/thioesterase active site
IPR000719 Eukaryotic protein kinase
W595 IPR001578 Ubiquitin carboxyl-terminal hydrolases family 1
IPR000694 Proline-rich region
C600 IPR000694 Proline-rich region
C635 IPR001471 AP2 domain/ethylene responsive element binding protein
IPR000104 Type I antifreeze protein
W700 IPR001471 AP2 domain/ethylene responsive element binding protein
W760 IPR002293 Permease for amino acids and related compounds, family I
C780 IPR000379 Esterase/lipase/thioesterase active site
W815 IPR001865 Ribosomal protein S2
C825 IPR001245 Tyrosine kinase catalytic domain
C875 IPR001472 Bipartite nuclear localization signal
IPR000719 Eukaryotic protein kinase
W920 IPR001440 TPR repeat
W930 IPR001623 DnaJ N-terminal domain
IPR001305 DnaJ central domain (CXXCXGXG)
IPR003095 DNAJ heat shock protein
IPR001472 Bipartite nuclear localization signal
W940 IPR001778 Pollen allergen Poa pI signature
IPR001471 AP2 domain/ethylene responsive element binding protein
IPR000104 Type I antifreeze protein
W950 IPR001472 Bipartite nuclear localization signal
IPR000425 MIP family
W1050 IPR001778 Pollen allergen Poa pI signature
W1110 IPR000173 Glyceraldehyde 3-phosphate dehydrogenase
C1125 IPR001472 Bipartite nuclear localization signal
IPR001057 Glutamate 5-kinase
C1145 IPR001472 Bipartite nuclear localization signal
C1190 IPR001471 AP2 domain/ethylene responsive element binding protein
IPR000104 Type I antifreeze protein
C1225 IPR002086 Aldehyde dehydrogenase family

This Article

  1. Genome Res. 11: 1167-1174

Preprint Server