The Human Transcript Map (Example)
| Chromo | Clone | From (bp) | To (bp) | GB4 (cR) | Evidence | HINT ID | Description |
| 16 | AC002040 | 31778068 | 31778186 | 192.52 | (+0+0) | AI128170_2 | ESTs |
| 16 | AC002040 | 31831164 | 31831640 | 192.52 | (+0+0) | AI285970_4 | ESTs |
| 16p12.2 | AC025273 | 31960092 | 32037384 | 194.27 | (++0+) | X87159_30 | Sodium channel, nonvoltage-gated 1, beta (Liddle syndrome) |
| 16 | AC025273 | 32055445 | 32055838 | 195.29 | (+0+0) | AI635217_4 | RETINOPATHY PROTEIN (Score: 140) |
| 16p12 | AC025273 | 32087870 | 32088023 | 196.52 | (++0+) | AB029003_296 | KIAA1080 protein |
| 16 | AC025273 | 32096920 | 32097148 | 195.29 | (+0+0) | AI022922_3 | NEURONAL THREAD PROTEIN AD7C-NTP (Score: 243) |
| 16 | AC025273 | 32109671 | 32109902 | 195.29 | (+0+0) | AW207413_1 | ESTs |
| 16p12 | AC002400 | 32159709 | 32203727 | 196.52 | (++0+) | AB029003_296 | KIAA1080 protein |
| 16 | AC002400 | 32194539 | 32194738 | 195.26 | (+0+0) | AI609753_1 | CG14939 PROTEIN (Score: 581) |
| 16 | AC002400 | 32215385 | 32215802 | 193.96 | (++0+) | AA833716_22 | ESTs |
| 16 | AC002400 | 32216451 | 32217395 | 193.96 | (++0+) | AW361820_26 | ESTs |
| 16 | AC002400 | 32217644 | 32237865 | 195.26 | (+0+0) | AC002400_5 | GLUTAMYL-TRNA SYNTHETASE (Score: 329) |
| 16 | AC002400 | 32251204 | 32264728 | 195.26 | (+0+0) | AC002400_34 | Ubiquitin-binding protein homolog human (Score: 2041) |
| 16 | AC002400 | 32265227 | 32267320 | 196.77 | (++0+) | W22792_117 | ESTs |
| 16 | AC002400 | 32275528 | 32275628 | 195.26 | (+00+) | AC002400_120 | NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex |
| 16 | AC002400 | 32277889 | 32278513 | 196.17 | (++0+) | H66286_10 | ESTs |
| 16 | AC009043 | 32364421 | 32368017 | 196.77 | (++0+) | W22792_117 | ESTs |
| 16 | AC008870 | 32425556 | 32540868 | 196.77 | (++0+) | AA811478_5 | DYNACTIN SUBUNIT P25 (Score: 167) |
| 16 | AC009043 | 32434020 | 32437557 | 196.77 | (++0+) | AI697625_20 | ESTs |
| 16 | AC008870 | 32437193 | 32447003 | 196.77 | (++0+) | AI697625_20 | ESTs |
| 16 | AC012185 | 32441029 | 32441121 | 193.96 | (+0+0) | AW445082_3 | RETINOBLASTOMA BINDING PROTEIN 2 HOMOLOG 1 (Score: 111) |
| 16 | AC012185 | 32474457 | 32474527 | 193.96 | (+0+0) | AA714835_9 | ESTs |
| 16 | AC012185 | 32477696 | 32507184 | 193.96 | (+0+0) | U01038_83 | Polo (Drosophila)-like kinase |
| 16 | AC012185 | 32493020 | 32493133 | 193.96 | (+0+0) | AA436947_7 | ESTs |
| 16p11.2 | AC012185 | 32496241 | 32497643 | 198.28 | (++0+) | X07109_116 | Protein kinase C, beta 1 |
| 16 | AC012185 | 32497057 | 32498921 | 193.96 | (+0+0) | AC002302_4 | SID470P (Score: 160) |
| 16 | AC012185 | 32499777 | 32500136 | 193.96 | (++00) | AA527435_16 | ESTs |
| 16 | AC012185 | 32503878 | 32505108 | 193.96 | (+0+0) | AW294825_1 | ESTs |
| 16 | AC012185 | 32507584 | 32508921 | 193.96 | (+00+) | AI732416_20 | IRE1, Saccharomyces cerevisiae, homolog of |
| 16 | AC012185 | 32517480 | 32519058 | 193.96 | (+0+0) | AI676060_3 | IRE1 (Score: 222) |
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Only a portion of the human 16p is presented. A more complete human transcript map is available as supplemental information from our Web site at http://pandora.med.ohio-state.edu/HINT Supplementary Table 14. Column 1, chromosome or cytoband information; Column 2, GenBank accession numbers for the genomic clones assembled in the GoldenPath map (July version); Columns 3 and 4, the start and end positions in base pair for each transcript consensus based on the GoldenPath chromosomal contigs (July version); Column 4, the GB4 positions for the genomic clones in cR, available from the Genemap'99 or the e-PCR map; Column 5, supporting or conflicting evidence (+ = supportive, − = conflicting, 0 = no data available) ordered by genomic and transcript radiation hybrid, fingerprint, and UNIGENE maps; Column 6, the consensus ID (HINT ID), defined by the GenBank accession number of the longest transcript followed by the number of the transcripts in the same UNIGENE clusters; Column 7, gene description derived from the original UNIGENE dataset and supplemented with additional protein homology information for the previously-anonymous ESTs. The newly annotated information can be found in the rows ending withBLAST scores.
