Table 1.
Interspersed Repeats in the Callipyge Imprinted Domain
| Human (250,000 bp analyzed) | Ovine (214,466 bp analyzed) | ||||
| Family | No. of elements | Percentage of sequence | Family | No. of elements | Percentage of sequence |
| SINEs | 132 | 11.01% | SINEs | 83 | 5.58% |
| ALUs | 70 | 7.84% | rum.spec. | 40 | 3.39% |
| MIRs | 62 | 3.17% | MIRs | 33 | 1.74% |
| LINEs | 56 | 10.27% | LINEs | 63 | 10.30% |
| LINE1 | 22 | 7.96% | LINE1 | 34 | 6.76% |
| LINE2 | 31 | 2.06% | LINE2 | 17 | 1.25% |
| L3/CR1 | 3 | 0.25% | L3/CR1 | 2 | 0.24% |
| BovB/Art2 | 10 | 2.05% | |||
| LTR elements | 19 | 4.77% | LTR elements | 13 | 1.70% |
| MaLRs | 8 | 0.96% | MaLRs | 5 | 0.36% |
| ERVL | 7 | 3.26% | ERVL | 5 | 1.08% |
| ERV-Class I | 1 | 0.20% | ERV-Class I | 2 | 0.11% |
| ERV-Class II | 0 | 0.00% | ERV-Class II | 0 | 0.00% |
| DNA elements | 13 | 1.46% | DNA elements | 9 | 0.66% |
| MER1 type | 10 | 0.70% | MER1 type | 6 | 0.45% |
| MER2 type | 2 | 0.68% | MER2 type | 1 | 0.03% |
| Unclassified | 0 | 0% | Unclassified | 1 | 0.04% |
| Total interspersed repeats | 27.51% | Total interspersed repeats | 18.29% | ||
| Simple repeats | 44 | 1.04% | Simple repeats | 33 | 0.91% |
| Low complexity | 31 | 0.84% | Low complexity | 32 | 0.51% |
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↵Repeats are labeled as defined in Smit (1999) and Smit and Green (2000).
