Table 1.
Genes Identified or Predicted in the 1A–3C Interval
| Cytology | Gene symbol | Gene | HMMER | EST | Matching gene(s) | EDGP vs. joint sequence |
| EG:23E12.1 | PF01019: G_glu_transpept | GH10105 | CG17636 | 0 | ||
| EG:23E12.5 | GH15984 | CG17617 | 0 | |||
| EG:23E12.2 | PF00169: PH | LD22360 | CG17960 | B− | ||
| PF00620: RhoGAP | ||||||
| PF00621: RhoGEF | ||||||
| EG:23E12.3 | CG17707 | 0 | ||||
| EG:BACR37P7.1 | PF01762: Galactosyl_T | CK01556 | CG3038 | 0 | ||
| EG:BACR37P7.2 | PF00856: SET | LD10743 | CG2995 | 0 | ||
| PF00023: ank | ||||||
| 1A8 | † EG:BACR37P7.3 | † cin | PF00994: MoCF_biosynth | GH09380 | CG2945 | 0 |
| EG:BACR37P7.9 | PF00106: adh_short | CG13377 | A− | |||
| 1A8 | EG:BACR37P7.7 | ewg | AF171732 | CG3114 | B+ | |
| EG:BACR37P7.8 | PF00071: ras | CG13375 | B− | |||
| EG:BACR37P7.5 | bs28b06 | CG12470 | 0 | |||
| EG:125H10.1 | LP06894 | CG3777 | 0 | |||
| 1B1 | EG:125H10.2 | y | CG3757 | 0 | ||
| 1B1 | EG:125H10.3 | ac | PF00010: HLH | CG3796 | 0 | |
| 1B2 | EG:198A6.1 | sc | PF00010: HLH | CG3827 | 0 | |
| 1B3 | EG:198A6.2 | l(1)sc | PF00010: HLH | CG3839 | 0 | |
| 1B4 | EG:EG0001.1 | pcl | PF00026: asp | CG13374 | 0 | |
| 1B4 | EG:165H7.2 | ase | PF00010: HLH | CG3258 | 0 | |
| EG:165H7.1 | Cyp4g1 | PF00067: p450 | GH20504 | CG3972 | 0 | |
| 1B4 | EG:165H7.3 | l(1)Bb | LD14543 | CG3923 | D+* | |
| EG:171D11.6 | LD04586 | CG13372 | D* | |||
| CG18166 | ||||||
| CG18273 | ||||||
| EG:171D11.2 | PF00664: ABC_membrane | LD18126 | CG3156 | A− | ||
| PF00005: ABC_tran | ||||||
| † EG:171D11.1 | PF00171: aldedh | GM07535 | CG17896 | 0 | ||
| EG:171D11.5 | CG17778 | 0 | ||||
| 1B7 | † EG:171D11.3 | † svr | PF00246: Zn_carbOpept | LD28490 | CG4122 | D* |
| CG18503 | ||||||
| EG:171D11.4; EG:65F1.3 | arginase | PF00491: arginase | GH02581 | CG18104 | C+ | |
| 1B8 | † EG:65F1.2 | † elav | PF00076: rrm | HL03451 | CG4262 | 0 |
| EG:65F1.1 | GH24496 | CG4293 | 0 | |||
| 1B8 | EG:65F1.5 | Appl | PF02177: A4_EXTRA | HL03850 | CG7727 | A+ |
| 1B9 | EG:118B3.1 | vnd | PF00046: homeobox | CG6172 | 0 | |
| EG:118B3.2 | PF00307: CH | GH04661 | CG13366 | 0 | ||
| 1B13 | EG:115C2.5 | mod(r) | LP01383 | CG17828 | 0 | |
| EG:115C2.1 | PF00294: pfkB | LP11157 | CG13369 | 0 | ||
| EG:115C2.12 | LP11709 | CG18451 | 0 | |||
| EG:115C2.6 | PF00096: zf-C2H2 | LD23988 | CG17829 | 0 | ||
| 1B13 | EG:115C2.7 | RpL36 | PF01158: Ribosomal_L36e | LD01128 | CG7622 | 0 |
| 1B13 | EG:115C2.2 | l(1)lBi | LD09823 | CG6189 | 0 | |
| 1B13 | EG:115C2.9 | Dredd | PF00655: ICE_p10 | LD14339 | CG7486 | B− |
| PF00656: ICE_p20 | ||||||
| 1B13 | EG:115C2.3 | su(s) | LD06838 | CG6222 | 0 | |
| EG:115C2.8 | GH16756 | CG13367 | A− | |||
| EG:115C2.11 | GH22310 | CG16982 | B+ | |||
| EG:115C2.10 | PF00856: SET | LD03312 | CG13363 | C− | ||
| 1B13 | EG:115C2.4 | skpA | PF01466: Skp1 | LD03188 | CG16983 | 0 |
| 1B14-C1 | EG:BACR19J1.1 | sdk | PF00041: fn3 | GM02010 | CG5227 | B+ |
| PF00047: ig | ||||||
| EG:BACR19J1.2 | PF00153: mito_carr | LD09021 | CG5254 | 0 | ||
| EG:BACR19J1.3 | GH28702 | CG5273 | 0 | |||
| EG:BACR19J1.4 | RpL22 | PF01776: Ribosomal_L22e | LP05628 | CG7434 | 0 | |
| EG:34F3.2 | PF00784: MyTH4 | LD11354 | CG12467 | D | ||
| PF00169: PH | ||||||
| EG:34F3.1 | LD26268 | CG12467 | D | |||
| EG:34F3.8 | PF00957: synaptobrevin | LD05791 | CG7359 | 0 | ||
| EG:34F3.10 | CG13358 | A+ | ||||
| EG:34F3.9 | CG13359 | B− | ||||
| 1B14-C1 | EG:34F3.3 | Rbf | PF01858: RB_A | LP07395 | CG7413 | 0 |
| PF01857: RB_B | ||||||
| EG:34F3.4 | LD26306 | CG16989 | 0 | |||
| EG:34F3.5 | LP04844 | CG13360 | 0 | |||
| EG:34F3.7 | PF02366: PMT | LP01681 | CG12311 | A− C− | ||
| EG:34F3.6 | fz3 | PF01534: Frizzled | CG16785 | A− | ||
| PF01392: Fz | ||||||
| EG:BACR7A4.2 | bs33b10 | CG3713 | 0 | |||
| EG:BACR7A4.3 | PF00089: trypsin | CG11664 | 0 | |||
| EG:BACR7A4.19 | PF00651: BTB | LP01394 | CG3711 | 0 | ||
| PF01344: Kelch | ||||||
| EG:BACR7A4.6 | 1.82 | CG3034 | 0 | |||
| EG:BACR7A4.18 | PF00956: NAP_family | GH17085 | CG3708 | A+ | ||
| EG:BAC7A4.20 | LP11534 | CG3706 | 0 | |||
| EG:BACR7A4.5 | LP07093 | CG11642 | 0 | |||
| EG:BACR7A4.17 | LD33276 | CG3704 | 0 | |||
| EG:BACR7A4.16 | LD03548 | CG3026 | 0 | |||
| EG:BACR7A4.15 | GH12139 | CG3703 | A− | |||
| EG:BACR7A4.14 | PF00106: adh_short | LP06734 | CG3699 | D−* | ||
| PF00678: adh_short_C2 | ||||||
| EG:BACR7A4.13 | PF00083: sugar_tr | GH13765 | CG3690 | 0 | ||
| EG:BACR7A4.7 | PF02268: TFIIA_gamma | GM03032 | CG11639 | 0 | ||
| EG:BACR7A4.12 | PF00036: efhand | bs03d05 | CG11638 | A++ | ||
| 1E1-4 | EG:BACR7A4.8 | anon-1Ed | LD29918 | CG3021 | C− | |
| EG:BACR7A4.11 | CDC45L | LD08729 | CG3658 | 0 | ||
| 1E1-4 | EG:BACR7A4.9 | anon-1Eb | GH11273 | CG14630 | A− | |
| 1E1-4 | EG:BACR7A4.10 | su(w[a]) | PF01805: Surp | SD01276 | CG3019 | B− |
| EG:103E12.2 | GH24974 | CG14629 | 0 | |||
| EG:103E12.3 | LD08339 | CG3655 | 0 | |||
| EG:BACR42I17.12 | PF00076: rrm | CG14628 | 0 | |||
| EG:BACR42I17.1 | PF01652: IF4E | bs10b09 | CG11392 | B+ | ||
| EG:BACR42I17.2 | LP03214 | CG11378 | 0 | |||
| EG:BACR42I17.3 | CG11384 | 0 | ||||
| EG:BACR42I17.4 | bs31h12 | CG11379 | 0 | |||
| EG:BACR42I17.5 | CG14627 | A++ | ||||
| EG:BACR42I17.6 | CG14626 | A− | ||||
| EG:BACR42I17.7 | CG11380 | A++ | ||||
| EG:BACR42I17.8 | CG14625 | A+ | ||||
| EG:BACR42I17.9 | CG11381 | D | ||||
| CG14624 | ||||||
| EG:BACR42I17.10 | LP08751 | CG11382 | 0 | |||
| EG:BACR42I17.11 | PF00096: zf-C2H2 | CG11398 | 0 | |||
| EG:33C11.3 | LP06890 | CG3638 | A+ C−− | |||
| EG:33C11.2 | GM08856 | CG11403 | 0 | |||
| EG:33C11.1 | A3-3 | PF00170: bZIP | GH24653 | CG11405 | 0 | |
| EG:114D9.1 | PF00036: efhand | CG11408 | 0 | |||
| EG:114D9.2 | PF02181: FH2 | LD26058 | CG14622 | A−− | ||
| EG:190E7.1 | CG18091 | 0 | ||||
| EG:8D8.1 | GM13066 | CG11411 | 0 | |||
| EG:8D8.2 | LD34263 | CG11409 | 0 | |||
| EG:8D8.6 | PF00583: Acetyltransf | LD06467 | CG11412 | B+ | ||
| EG:8D8.8 | GM12784 | CG11418 | 0 | |||
| EG:8D8.7 | PF00335: transmembrane4 | LP04678 | CT11415 | 0 | ||
| EG:8D8.3 | PF00324: aa_permeases | LD15480 | CG12773 | 0 | ||
| EG:8D8.4 | LD08351 | CG11417 | 0 | |||
| EG:8D8.5 | png | PF00069: pkinase | CG11420 | 0 | ||
| EG:132E8.1 | PF00076: rrm | LD09340 | CG3056 | 0 | ||
| 1F | EG:132E8.2 | SNF1A | PF00069: pkinase | GH05909 | CG3051 | 0 |
| EG:132E8.3 | PF00085: thiored | LD03613 | CG3719 | 0 | ||
| EG:132E8.4 | CG11448 | 0 | ||||
| EG:49E4.1 | futsch | GH21135 | CG3064 | D* | ||
| EG:BACN32G11.1 | CG18531 | 0 | ||||
| EG:BACN32G11.2 | GH10964 | CG14785 | 0 | |||
| EG:BACN32G11.3 | PF01535: PPR | LD01992 | CG14786 | 0 | ||
| EG:BACN32G11.4 | PF00378: ECH | LP07530 | CG14787 | A− | ||
| EG:BACN32G11.5 | PF01926: MMR_HSR1 | HL05876 | CG14788 | 0 | ||
| EG:BACN32G11.6 | GH07929 | CG14789 | A− | |||
| EG:80H7.10 | GH22272 | CG14777 | 0 | |||
| EG:80H7.1 | PF00089: trypsin | — | ||||
| EG:80H7.2 | LD18706 | CG14779 | 0 | |||
| EG:80H7.3 | PF00089: trypsin | CG14780 | 0 | |||
| EG:80H7.4 | PF00071: ras | GM10914 | CG14791 | B− | ||
| EG:80H7.11 | LD02045 | CG14781 | B+ | |||
| EG:80H7.5 | PF01363: FYVE | GM03532 | CG14782 | 0 | ||
| PF00169: PH | ||||||
| 2B1-2 | EG:80H7.6 | sta | PF00318: Ribosomal_S2 | LD27557 | CG14792 | A− B C+ |
| EG:80H7.7 | PF00060: lig_chan | CG14793 | D* | |||
| EG:196F3.1 | — | |||||
| EG:196F3.3 | CG14795 | A+ | ||||
| EG:196F3.2 | PF02214: K_tetra | LD05656 | CG14783 | C+ | ||
| EG:56G7.1 | PF01607: Chitin_bind_2 | CG14796 | 0 | |||
| 2B5 | † EG:123F11.1; EG:17A9.1; EG:25D2.1 | † br | PF00651: BTB PF00096: zf-C2H2 | LP05017 | CG11491 | 0 |
| 2B6 | EG:171E4.1 | dor | LD12589 | CG3093 | 0 | |
| EG:171E4.4 | CK00326 | CG3740 | D* | |||
| EG:171E4.2 | PF00560: LRR | CG3095 | A+ C+ | |||
| EG:171E4.3 | CG3737 | 0 | ||||
| EG:73D1.1 | LD24507 | CG3791 | 0 | |||
| 2B6-7 | EG:9D2.1 | b6 | HL05401 | CG3100 | 0 | |
| EG:9D2.2 | GH23439 | CG3783 | D* | |||
| 2B6-8 | EG:9D2.3 | a6 | LD13641 | CG3771 | C− | |
| EG:9D2.4 | PF00089: trypsin | CG3795 | 0 | |||
| EG:4F1.1 | GH21860 | CG14808 | 0 | |||
| EG:BACN35H14.1 | Adar | PF02137: A_deamin | LD31451 | CG12598 | A+ | |
| PF00035: dsrm | ||||||
| EG:137E7.1 | LD19625 | CG17968 | 0 | |||
| EG:131F2.2 | PF00929: Exonuclease | CG14801 | A− | |||
| EG:131F2.3 | LP07325 | CG14812 | 0 | |||
| EG:63B12.10 | δCOP | LD30910 | CG14813 | 0 | ||
| EG:63B12.6 | GM12676 | CG14814 | A− | |||
| EG:63B12.13 | GH20211 | CG14802 | 0 | |||
| EG:63B12.5 | PF00515: TPR | GH08708 | CG14815 | 0 | ||
| EG:63B12.9 | LD13889 | CG14803 | B+ | |||
| EG:63B12.4 | PF00300: PGAM | LD30851 | CG14816 | 0 | ||
| EG:63B12.8 | LD10891 | CG14804 | 0 | |||
| EG:63B12.11 | GH01621 | CG14817 | 0 | |||
| EG:63B12.7 | PF00400: WD40 | LD02447 | CG14805 | B+ | ||
| EG:63B12.12 | LP05103 | CG14818 | 0 | |||
| 2B15 | EG:63B12.3 | trr | PF00856: SET | GM10003 | CG3848 | B++ |
| 2B15 | EG:63B12.2 | anon-2Bd | PF00252: Ribosomal_L16 | GH05976 | CG3109 | B+ |
| 2B15 | EG:86E4.6 | arm | PF00514: Armadillo_seg | LD10209 | CG11579 | A+ |
| EG:86E4.2 | PF01532: Glyco_hydro_47 | LD21416 | CG3810 | C+ | ||
| EG:86E4.3 | PF00400: WD40 | CG17766 | A− | |||
| EG:86E4.4 | LD27573 | CG3480 | 0 | |||
| 2B15 | EG:86E4.1 | eIF-2bε | PF02020: W2 | LD26247 | CG3806 | 0 |
| PF00132: hexapep | ||||||
| EG:86E4.5 | PF00783: IPPc | GH18456 | CG3573 | 0 | ||
| EG:39E1.1 | LD22420 | CG11596 | 0 | |||
| EG:39E1.3 | LP09039 | CG3857 | 0 | |||
| EG:39E1.2 | LD09945 | CG3587 | 0 | |||
| EG:BACH61I5.1 | CG3600 | 0 | ||||
| EG:133E12.2 | PF00104: hormone_rec | CG16902 | D* | |||
| PF00105: zf-C4 | ||||||
| EG:133E12.3 | PF01650: Peptidase_C13 | CG4406 | A+ | |||
| EG:133E12.4 | east | LD33602 | CG4399 | 0 | ||
| 2C3 | † EG:133E12.1 | † Actn | PF00307: CH | HL01581 | CG4376 | 0 |
| PF00036: efhand | ||||||
| PF00435: spectrin | ||||||
| 2C3 | EG:22E5.1 | usp | PF00104: hormone_rec | LD09973 | CG4380 | 0 |
| PF00105: zf-C4 | ||||||
| EG:22E5.12 | PF00097: zf-C3HC4 | CG4325 | 0 | |||
| EG:22E5.11 | PF00001: 7tm_1 | CG4322 | C+ | |||
| EG:22E5.10 | PF00001: 7tm_1 | GM02327 | CG4313 | 0 | ||
| EG:22E5.8 | PF00069: pkinase | GH06888 | CG4290 | 0 | ||
| EG:22E5.7 | LD08665 | CG4281 | D* | |||
| EG:22E5.5 | PF00355: Rieske | GH11732 | CG4199 | A+ | ||
| PF00070: pyr_redox | ||||||
| EG:22E5.6 | LD31238 | CG4194 | 0 | |||
| EG:22E5.3 | PF01137: RCT | GH07716 | CG4061 | 0 | ||
| EG:22E5.4 | PF02390: Methyltransf_4 | GM01339 | CG4045 | C+ | ||
| EG:22E5.9 | LP10820 | CG4025 | 0 | |||
| EG:67A9.2 | LD01561 | CG16903 | C−− | |||
| EG:67A9.1 | CK00561 | CG3981 | A− | |||
| 2D3 | † EG:BACN25G24.2 | † csw | PF00017: SH2 | HL03192 | CG3954 | 0 |
| PF00102: Y_phosphatase | ||||||
| 2D3 | EG:BACN25G24.3 | ph-d | PF00536: SAM | GH08934 | CG3895 | A−− B+ C+ |
| 2D3 | EG:87B1.5 | ph-p | PF00536: SAM | GH19743 | D* | |
| EG:87B1.3 | PF01565: FAD_binding_4 | GH17284 | CG3835 | 0 | ||
| 2D6 | EG:87B1.4 | Pgd | PF00393: 6PGD | GH13486 | CG3724 | 0 |
| 2D6 | EG:87B1.6 | bcn92 | CG3717 | 0 | ||
| 2D6 | EG:87B1.2 | wapl | LD29979 | CG3707 | A+ | |
| 2D6 | EG:87B1.1 | Cyp4d1 | PF00067: p450 | GH01333 | CG3656 | 0 |
| EG:152A3.3 | HL02445 | CG3630 | 0 | |||
| EG:152A3.7 | anon-2Db | CG3621 | 0 | |||
| EG:152A3.2 | Cyp4d14 | PF00067: p450 | HL05508 | CG3540 | 0 | |
| 2E1 | EG:152A3.4 | Cyp4d2 | PF00067: p450 | GH09810 | CG3466 | A− |
| 2E1 | EG:152A3.6 | Cyp4ae1 | PF00067: p450 | GH24265 | CG10755 | 0 |
| 2E1 | EG:152A3.5 | pn | GM10090 | CG3461 | 0 | |
| 2E3 | EG:152A3.1 | Nmd3 | LD13746 | CG3460 | 0 | |
| EG:17E2.1 | LD17911 | CG3457 | B− | |||
| 2E3 | EG:103B4.3 | Mct1 | PF01587: MCT | LP01643 | CG3456 | A− |
| EG:103B4.2 | LP02712 | CG18031 | D | |||
| 2E3 | EG:103B4.4 | msta | GH20239 | CG18033 | 0 | |
| 2E3 | EG:103B4.1 | Vinc | PF01044: Vinculin | LD16157 | CG3299 | 0 |
| 2E3 | EG:30B8.4 | pcx | LD27929 | CG3443 | B−− | |
| 2F1 | EG:30B8.2 | kz | GH21962 | CG3228 | 0 | |
| 2F1 | EG:30B8.5 | fs(1)K10 | LD08992 | CG3218 | 0 | |
| 2F1 | EG:30B8.7 | Or2a | CG3206 | C | ||
| 2F1 | EG:30B8.1 | crn | PF02184: HAT | LP05055 | CG3193 | 0 |
| EG:30B8.3 | PF00650: CRAL_TRIO | GM01086 | CG3191 | 0 | ||
| EG:30B8.6 | GH06335 | CG3078 | D | |||
| EG:25E8.3 | PF00400: WD40 | LD29959 | CG3071 | B+ | ||
| EG:25E8.2 | PF00179: UQ_con | LD09991 | CG2924 | A+ C− | ||
| EG:25E8.1 | PF00012: HSP70 | GH11566 | CG2918 | 0 | ||
| EG:25E8.6 | CG2879 | D | ||||
| EG:25E8.4 | GH04956 | CG2865 | 0 | |||
| EG:BACH48C10.1 | CG14050 | 0 | ||||
| EG:BACH48C10.2 | GH19593 | CG2854 | C− | |||
| 2F6 | EG:BACH48C10.3 | phl | PF00130: DAG_PE-bind | GH03557 | CG2845 | B+ |
| PF02196: RBD | ||||||
| PF00069: pkinase | ||||||
| EG:BACH48C10.6 | CG14048 | 0 | ||||
| 2F6 | EG:BACH48C10.5 | ptr | GH02860 | CG2841 | A+ | |
| EG:BACH48C10.4 | GH27724 | CG14047 | D | |||
| EG:BACH7M4.1 | SD05785 | CG14045 | A−− | |||
| EG:BACH7M4.2 | PF00168: C2 | CK01827 | CG14045 | A− C− | ||
| PF00505: PDZ | ||||||
| EG:BACH7M4.4 | CG12496 | C− | ||||
| 3A2 | EG:BACH7M4.5 | gt | CG7952 | 0 | ||
| 3A3 | † EG:BACH59J11.1 | † tko | PF00164: Ribosomal_S12 | GM03810 | CG7925 | 0 |
| EG:BACH59J11.2 | PF00041: fn3 | SD01373 | CG13756 | B+ | ||
| 3A3 | EG:BACH59J11.3 | z | CG7803 | 0 | ||
| EG:BACR25B3.11 | pcan | PF0008: EGF | GM03359 | CG7981 | D* | |
| PF00047: ig | ||||||
| PF00054: laminin_G | ||||||
| PF00057: ldl_recept_a | ||||||
| EG:BACR25B3.10 | PF00047: ig | GM02481 | CG7981 | D* | ||
| EG:BACR25B3.1 | PF00047: ig | GM06086 | CG7981 | A++ C− | ||
| PF00052: laminin_B | ||||||
| PF00053: laminin_EGF | ||||||
| PF00057: ldl_recept_a | ||||||
| EG:BACR25B3.2 | PF00057: ldl_recept_a | CG12497 | A+ B+ | |||
| EG:BACR25B3.3 | PF00002: 7tm_2 | CG13758 | D | |||
| EG:BACR25B3.4 | PF01813: ATP-synt_D | GH28048 | CG8310 | D | ||
| EG:BACR25B3.5 | GH02552 | CG13759 | B+ | |||
| EG:BACR25B3.6 | LD41675 | CG13760 | A−− | |||
| EG:BACR25B3.7 | wds | PF00400: WD40 | LD30385 | CG17437 | 0 | |
| 3A8 | EG:BACR25B3.8 | egh | CG9659 | 0 | ||
| 3A8 | EG:BACR25B3.9 | Klp3A | PF00225: kinesin 14 | LD21815 | CG8590 | 0 |
| 3A9 | EG:BACR7C10.3 | mit(1)15 | LD31038 | CG9900 | 0 | |
| EG:BACR7C10.4 | Bzd | PF01753: zf-MYND | CG13761 | C+ | ||
| EG:BACR7C10.6 | PF00335: transmembrane4 | GH15125 | CG10742 | 0 | ||
| EG:BACR7C10.1 | LD08769 | CG9904 | 0 | |||
| EG:BACR7C10.7 | CG13762 | B− | ||||
| EG:BACR7C10.2 | PF00613: PI3Ka | GH26308 | CG10260 | D | ||
| PF00454: PI3_PI4_kinase | ||||||
| 3B1 | EG:155E2.3 | sgg | PF00069: pkinas3 | GM02018 | CG2621 | A+ |
| 3B2 | EG:155E2.2 | HLH3B | PF00010: HLH | CG2655 | 0 | |
| EG:155E2.5 | GH07966 | CG2652 | 0 | |||
| 3B2 | † EG:155E2.4 | † per | PF00989: PAS | GH01975 | CG2647 | A− B+ |
| 3B2 | EG:155E2.1 | anon-3B1.2 | CG2650 | B− | ||
| EG:100G10.7 | anon-3Ba | PF0004: AAA | GH01006 | CG2658 | 0 | |
| PF01434: Peptidase_M41 | ||||||
| EG:100G10.6 | PF00628: PHD | HL01595 | CG2662 | 0 | ||
| EG:100G10.5 | anon-3Bb | LD37122 | CG2675 | A+ | ||
| EG:100G10.3 | PF01008: IF-2B | CG2677 | 0 | |||
| EG:100G10.4 | GH11163 | CG2680 | B+ | |||
| EG:100G10.2 | GH02982 | CG2681 | B− | |||
| EG:100G10.1 | LD25954 | CG2685 | 0 | |||
| EG:100G10.8; EG:95B7.10 | LD34251 | CG2695 | 0 | |||
| 3B4 | EG:95B7.9 | anon-3Bd | GH08386 | CG2701 | 0 | |
| 3C1 | EG:95B7.8 | fs(1)Yb | CG2706 | 0 | ||
| 3C1 | EG:95B7.4 | fs(1)Ya | LD47547 | CG2707 | A− | |
| EG:95B7.5 | CG2709 | 0 | ||||
| 3C1 | EG:95B7.6 | dwg | PF00096: zf-C2H2 | LD08032 | CG2711 | 0 |
| EG:95B7.3 | LD05179 | CG2713 | 0 | |||
| EG:95B7.7 | anon-3Be | PF00096: zf-C2H2 | LD39664 | CG2712 | 0 | |
| 3C2 | EG:95B7.2 | crm | PF00249: myb_DNA- | LD09365 | CG2714 | 0 |
| binding | ||||||
| EG:95B7.1 | PF00804: Syntaxin | CG2715 | 0 | |||
| EG:BACN33B1.2 | HL08104 | CG2766 | D* | |||
| CG2716 | ||||||
| 3C2 | EG:BACN33B1.1 | w | PF00005: ABC_tran | GH06126 | CG2759 | 0 |
| EG:BACR43E12.1 | CG12498 | 0 | ||||
| EG:BACR43E12.7 | GM07661 | CG14416 | 0 | |||
| EG:BACR43E12.6 | CG14417 | 0 | ||||
| EG:BACR43E12.5 | CG14417 | 0 | ||||
| EG:BACR43E12.4 | PF00569: ZZ | GH01442 | CG3526 | A++ | ||
| EG:100G7.6 | CG3588 | A−− C+ | ||||
| EG:100G7.5 | CG14424 | 0 | ||||
| 3C5 | EG:100G7.1 | anon-3Ca | CG18089 | 0 | ||
| 3C5 | EG:100G7.2 | anon-3Cb | CG3591 | 0 | ||
| EG:100G7.3 | CG3598 | 0 |
-
All known or predicted genes have a symbol in the formEG:#, where the # indicates the clones on which they were first discovered followed by a dot and integer. Genes previously known are also shown with their FlyBase symbols and, if determined, cytological locations. The EST column indicates a matching EST sequence from either the BDGP collection or B. Oliver's testes-derived EST collection (as submitted to GenBank; see Andrews et al. 2000). Only one cDNA clone name is listed for each gene. The column headed “Matching Gene(s)” indicates the matching gene from the Joint Sequence. The column headed “EDGP vs. Joint Sequence” indicates the result of comparing the EDGP and Joint Sequence at the predicted protein level. In this column, 0 indicates identity or <1% difference in sequence; A, that the sequences differ in their predicted start sites; B, that they differ in their predicted termination sites; and C, that they differ by a predicted exon or intron. A ‘D’ indicates that the gene models predicted by us and by the Joint Sequence differ very markedly; an accompanying asterisk indicates that we have evidence that the EDGP model is the more correct (see text). A plus sign indicates the EDGP sequence is longer than the CG sequence; a minus sign indicates that it is shorter. For more details see the supplementary data. Only positive hits of known or predicted proteins to PFAM are shown (see text). A dagger before a gene symbol indicates a gene with alternatively spliced messages.
