A Comparative Genomics Approach to Prediction of New Members of Regulons

Table 2.

Site Score Distributions of Training Sequences and All 22-Mers in Both Genomes Scanned by PATSER

CRP sites FNR sites
Range Mean ± S.D. Range Mean ± S.D.
All training sequences 8.77–20.62 14.41 ± 3.6 All training sequences 12.0–25.84 19.80 ± 4.5
All 22-mers in E. coli  genome −60.97–26.65 −15.84 ± 8.5 All 22-mers in E. coli  genome −63.32–28.97 −23 ± 9.3
All 22-mers in H. influenzaegenome −60.96–26.67 −16.06 ± 8.1 All 22-mers inH. influenzaegenome −63.28–28.99 −21.48 ± 9.1
  • Scores are in unit of bit. S.D., standard deviation.

This Article

  1. Genome Res. 11: 566-584

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