Identification of Genes Encoding Amino Acid Permeases by Inactivation of Selected ORFs from the Synechocystis Genomic Sequence

Table 4.

ORFs of Synechocystis sp. Strain PCC 6803 Inactivated in This Work

ORF ORF coordinates Oligonucleotides coordinates Inserted cassette and insertion site
slr1145 809450–810658 809342–809362, 810371–810351 C.K3 or C.C1, NcoI (Klenow-filled)
sll1270 1116021–1114429 1116052–1116033, 1115052–1115072 C.C1,KpnI
slr1735 1317712–1318470 1317628–1317647, 1318781–1318761 C.K3 or C.C1,SmaI
slr0949 2017104–2017964 2017139–2017158, 2018372–2018353 C.K3,HpaI
slr1881 1239490–1240212 1239564–1239583, 1240494–1240475 C.K3,StuI
sll0146 2192051–2190933 2191877–2191858, 2190922–2190941 C.K3, SmaI
sll1102, sll1103 1914652–1914113, 1914113–1912776 1914799–1914779, 1913403–1913423 C.K3, 2 BamHI sites
sll1104 1912786–1911896 1912674–1912654, 1911573–1911593 C.K3, XbaI
  • The names and chromosome coordinates (Kaneko et al. 1996) of the inactivated ORFs are indicated in the first and second columns, respectively. The coordinates of the oligonucleotides used for PCR amplification of those ORFs are indicated in the third column. The inserted antibiotic resitance-encoding gene cassette and the restriction endonuclease insertion site(s) are indicated in the last column.

This Article

  1. Genome Res. 11: 2034-2040

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