Comparative Genomics Between Rice and Arabidopsis Shows Scant Collinearity in Gene Order

Table 2.

Simulation of the Probability of Finding Hit (Homolog) of a Rice BAC to anArabidopsis BAC

1 hit/BAC 2 hits/BAC 3 hits/BAC 4 hits/BAC
A/B/C (std) A/B (std) C (std) A (std) B (std) C (std) A (std) B (std)
Expected 0.992 0.25 0.00099 0.00157 0.00014 0 0.00001 0
(1.11e-16) (0.32) (0.003) (0.0035) (0.0011) (0) (0.0003) (0)
Observed 1 0.055 5e-3 0.012 0.007 5e-4 2.7e-3 8.4e-4
  • (A) Number of homologs on BAC; (B) homologs are in order on BAC; (C) homologs are in uninterrupted order on BAC.

  • Std, standard deviation.

This Article

  1. Genome Res. 11: 2020-2026

Preprint Server