Additional Complexity on Human Chromosome 15q: Identification of a Set of Newly Recognized Duplicons (LCR15) on 15q11–q13, 15q24, and 15q26

Table 1.

Amplimers Developed from Direct Sequencing of BAC, PAC, and YAC Ends

Sequence GenBank  acc. no. F (5′-3′) R (5′-3′)
RG1-F AJ286911 AGTTTCCTCACAGTGCATGC CAGGCTCAGATGCAGGTAC
RG1-R AJ286912 TTCACTTTTCCTGGAGCTGC AGACCTAGGACACAAGGATG
10d9-R AJ277870 CTGAAAGATATCAGCACCTTG TGGTCATAGCCATCCATGTAG
16o12-T7 AJ400818 GAGAGATATTGGTCAAAGGG CCTCTCAGCAAATTTAAGCATC
30c6-F AJ286924 CTTATGTAACACAGTATCTGTGG GGTCTTATAGTCTTCAGTGG
30c6-R AJ286925 TCAGAGTCACCCATCTAAGG GGGAGCCACTTTAAGCTCC
104F6-F AJ400820 GGGCAGTAACAGGAACAGG TTTATCTGCGTGGCCTTTGC
104F6-R AJ400819 TTACTCTGAATTCTAAATTTCC TTGCCCAGCTGGGTTCTGG
167c4-R AJ286928 CATCTCCAGCTCAACCTCATAGG ATGGGAGACAGTGCCAGG
309j8-T7 AJ400817 TAGCAGGTGACAGCTCCATG GTTAAAAACTAAGACGCAAATGC
330n12-T7 AJ276449 CGAAATGAGACTGGAAGTTGGC CTTGTTCAGGAACAAACCAGCC
330n12-SP6 AJ276448 TCAGAACTGAAGTGTATGGATC AGTTATGTTCCTCACTTGATGC
463e12-F AJ286921 TCACTGTGACTTCTCACTGC GGAATAGGAAGTCATATCAGG
463e12-R AJ286922 GCCCTGCTCCATGACCTG CTCTGGCATTCTCCTCAAGC
REP471 AJ286913 GCACTTAAAGCTCTTTACTGG TGGTTTTCAATGATTGCAAGTC
567n19-F AJ286926 CAGGACTGCAATTCCTCCAG ATACTGGAATTGCTCAGAGG
576n19-R AJ286927 GACTTCTGGATGGGGTATGG GAGACAGATCTACTAGGTCC
10k5-T7 AJ286894 GCACACTGCAGCAGAGGT GTGTCCTGGGACTGCCAAG
10k5-SP6 AJ286895 CTTCTCAGGCAACCCTACC CTCATCTCCTGGCTCACTG
68e5-T7 AJ286896 TTAGGACTAGGTTGTTCTCAC TTGGGTACCTGTCACTCTG
68e5-SP6 AJ286897 CATTGAACAACATGTACAAGG GCCCTTGGTAAAAGAGTGAG
76a14-T7 AJ286899 ACAATTCTGATGCCAGTGTTC GAGGAGTCATAGCAGCCAC
76a14-SP6 AJ286898 AGTTCTACAAGAGCAGGGAC AATCTTCTCTAGCTACTCAG
80n21-T7 AJ286907 ATAGAAACTTCAGGTCCTTGC TTGCCTCCATCCTTAGAAGC
80n21-SP6 AJ286906 CTTACAGTAGTCTTCTGGATC CCAAGTTCAGCTGAGGCTG
103k15-T7 AJ286903 TACTGAGAGGTGACATGCC CTGAAGGCACCAACAGATGC
103k15-SP6 AJ286902 TCGCCCAGTCTCCTCATG TCCCCTGAACCTATAAGC
126h9-T7 AJ277872 GAAGCTCTCCTGAACCCTC GTTCATTTAATCCTCACCATCAC
142g11-T7 Designed from   pDJ443n8   (AC004587) GTTCCACTTCAAACTTCATGG AGACAGGGTTAACAGCTACG
142g11-SP6 AJ286900 TTACTGAAATCAATTACTCAC CTACTTTGGGGACACTATCC
216i14-T7 AJ286905 ATTCTCATCCAAATCCACCTG GTGTTGTGAGAGACCACGTG
216i14-SP6 AJ286904 GTATCCCAAATCCCGTCTTG GGAAAATCTTTCTTGGAGATC
223e10-SP6 AJ286916 AATGGAATTAGAAATTGCATAGAG GTAAGTTGTAAACTTAGGTTGATG
252a23-T7 AJ286909 ACCAAAGGGGCAAAGAGCAG CGATTTTCTTAGGGTGTGTATC
252a23-SP6 AJ286910 ACCTTGGAAGCCCTTAATCC TCCTTATATGAGGCTGGTCC
802_b_4-Left AJ286893 GTCTTGCTAGAGCTGAGG CATGTTGACCACGACCAG
802_b_4-Right AJ286892 GAATTCTCTGGCCCAGCTGAC CCTTCACTTAAAAACAGCC

This Article

  1. Genome Res. 11: 98-111

Preprint Server