Genomewide Function Conservation and Phylogeny in the Herpesviridae

Table 2.

Number of Homologous Families Shared between Any Two Genomes

HSV-1 HSV-2 VZV EHV-1 EHV-4 BHV-1 GHV-2 HHV-5 HHV-6A HHV-6B HHV-7 HHV-4 AHV-1 HVA-3 RRV HVS EHV-2 HHV-8 MHV-68
HSV-1 74 100 86 82 82 82 80 35 36 36 36 38 41 40 38 38 39 38 38
HSV-2 74 75 86 82 82 83 80 35 36 36 36 38 41 40 38 37 39 37 37
VZV 58 58 67 94 94 89 81 39 40 40 40 42 43 43 43 43 45 43 42
EHV-1 61 62 63 77 100 92 83 34 35 35 35 39 41 40 38 37 39 36 36
EHV-4 61 62 63 77 77 92 83 34 35 35 35 39 41 40 38 37 39 36 36
BHV-1 59 60 60 66 66 72 81 36 37 37 37 39 41 40 39 39 40 39 39
GHV-2 52 52 53 54 54 53 65 40 42 42 42 43 45 43 43 43 45 43 43
HHV-5 26 26 26 26 26 26 26 167 54 54 58 45 51 51 49 47 48 44 46
HHV-6A 27 27 27 27 27 27 27 56 104 92 85 45 51 51 49 47 48 44 46
HHV-6B 27 27 27 27 27 27 27 56 96 104 83 43 50 50 47 46 47 43 45
HHV-7 27 27 27 27 27 27 27 56 82 81 96 45 51 51 49 47 48 44 46
HHV-4 28 28 28 29 29 28 28 33 33 32 33 74 71 69 68 67 68 68 63
AHV-1 29 29 29 29 29 29 29 36 36 36 36 50 70 80 80 81 80 80 76
HVA-3 28 28 29 28 28 28 28 36 36 36 36 48 56 70 90 97 80 90 83
RRV 28 28 29 28 28 28 28 36 36 36 36 50 56 63 74 89 77 96 81
HVS 28 28 29 28 28 28 28 36 36 36 36 50 57 68 66 76 76 87 79
EHV-2 29 29 30 29 29 29 29 36 36 36 36 50 56 56 57 57 75 76 71
HHV-8 28 28 29 28 28 28 28 36 36 36 36 50 56 63 71 66  57 81 78
MHV-68 28 28 28 28 28 28 28 36 36 36 36 47 53 58 60 60 53 61 78

  • Absolute number (lower triangle and diagonal, shaded) or percentage with respect to the genome with the lowest number of homologous functions (upper triangle)

This Article

  1. Genome Res. 11: 43-54

Preprint Server



Current Issue

  1. January 2026, 36 (1)
  1. Current Issue
  1. Alert me to new issues of Genome Research