Table of Contents

January 2001; 11 (1)

INSIGHT/OUTLOOK

  • Impending Doom: Antibiotic Exposure and Bacterial Gene Expression

    • Timothy Palzkill
    Genome Res. January 1, 2001 11: 1-2; doi:10.1101/gr.170901

REVIEW

  • Pyrosequencing Sheds Light on DNA Sequencing

    • Mostafa Ronaghi
    Genome Res. January 1, 2001 11: 3-11; doi:10.1101/gr.150601

ARTICLE

  • Biased Distribution of Inverted and Direct Alus in the Human Genome: Implications for Insertion, Exclusion, and Genome Stability

    • Judith E. Stenger,
    • Kirill S. Lobachev,
    • Dmitry Gordenin,
    • Thomas A. Darden,
    • Jerzy Jurka,
    • and Michael A. Resnick
    Genome Res. January 1, 2001 11: 12-27; doi:10.1101/gr.158801

LETTERS

  • Gene Expression Changes Triggered by Exposure of Haemophilus influenzae to Novobiocin or Ciprofloxacin: Combined Transcription and Translation Analysis

    • Hans Gmuender,
    • Karin Kuratli,
    • Karin Di Padova,
    • Christopher P. Gray,
    • Wolfgang Keck,
    • and Stefan Evers
    Genome Res. January 1, 2001 11: 28-42; doi:10.1101/gr.157701

  • Genomewide Function Conservation and Phylogeny in the Herpesviridae

    • M. Mar Albà,
    • Rhiju Das,
    • Christine A. Orengo,
    • and Paul Kellam
    Genome Res. January 1, 2001 11: 43-54; doi:10.1101/gr.149801

  • Patterns of Chromosomal Duplication in Maize and Their Implications for Comparative Maps of the Grasses

    • Brandon S. Gaut
    Genome Res. January 1, 2001 11: 55-66; doi:10.1101/gr.160601

  • Identification of New X-Chromosomal Genes Required for Drosophila Oogenesis and Novel Roles for fs(1)Yb, brainiac and dunce

    • Andrew Swan,
    • Sirine Hijal,
    • Andres Hilfiker,
    • and Beat Suter
    Genome Res. January 1, 2001 11: 67-77; doi:10.1101/gr.156001

  • Human and Mouse α-Synuclein Genes: Comparative Genomic Sequence Analysis and Identification of a Novel Gene Regulatory Element

    • Jeffrey W. Touchman,
    • Anindya Dehejia,
    • Ornit Chiba-Falek,
    • Deborah E. Cabin,
    • Jody R. Schwartz,
    • Bonnie M. Orrison,
    • Mihael H. Polymeropoulos,
    • and Robert L. Nussbaum
    Genome Res. January 1, 2001 11: 78-86; doi:10.1101/gr.165801

  • Long-Range Comparison of Human and Mouse SCL Loci: Localized Regions of Sensitivity to Restriction Endonucleases Correspond Precisely with Peaks of Conserved Noncoding Sequences

    • Berthold Göttgens,
    • James G.R. Gilbert,
    • Linda M. Barton,
    • Darren Grafham,
    • Jane Rogers,
    • David R. Bentley,
    • and Anthony R. Green
    Genome Res. January 1, 2001 11: 87-97; doi:10.1101/gr.153001

  • Additional Complexity on Human Chromosome 15q: Identification of a Set of Newly Recognized Duplicons (LCR15) on 15q11–q13, 15q24, and 15q26

    • Miguel Angel Pujana,
    • Marga Nadal,
    • Mònica Gratacòs,
    • Belén Peral,
    • Katalin Csiszar,
    • Rogelio González-Sarmiento,
    • Lauro Sumoy,
    • and Xavier Estivill
    Genome Res. January 1, 2001 11: 98-111; doi:10.1101/gr.155601

METHODS

  • Assessing Clusters and Motifs from Gene Expression Data

    • Lars M. Jakt,
    • Liang Cao,
    • Kathryn S.E. Cheah,
    • and David K. Smith
    Genome Res. January 1, 2001 11: 112-123; doi:10.1101/gr.148301

  • Efficient Male and Female Germline Transmission of a Human Chromosomal Vector in Mice

    • Thierry Voet,
    • Joris Vermeesch,
    • An Carens,
    • Joachim Dürr,
    • Charlotte Labaere,
    • Hein Duhamel,
    • Guido David,
    • and Peter Marynen
    Genome Res. January 1, 2001 11: 124-136; doi:10.1101/gr.159901

  • An Efficient Method for High-Fidelity BAC/PAC Retrofitting with a Selectable Marker for Mammalian Cell Transfection

    • Zunde Wang,
    • Peter Engler,
    • Angelika Longacre,
    • and Ursula Storb
    Genome Res. January 1, 2001 11: 137-142; doi:10.1101/gr.159001

  • Genetic Analysis of Case/Control Data Using Estimated Haplotype Frequencies: Application to APOE Locus Variation and Alzheimer's Disease

    • Daniele Fallin,
    • Annick Cohen,
    • Laurent Essioux,
    • Ilya Chumakov,
    • Marta Blumenfeld,
    • Daniel Cohen,
    • and Nicholas J. Schork
    Genome Res. January 1, 2001 11: 143-151; doi:10.1101/gr.148401

  • Robust and Accurate Single Nucleotide Polymorphism Genotyping by Dynamic Allele-Specific Hybridization (DASH): Design Criteria and Assay Validation

    • Jonathan A. Prince,
    • Lars Feuk,
    • W. Mathias Howell,
    • Magnus Jobs,
    • Tesfai Emahazion,
    • Kaj Blennow,
    • and Anthony J. Brookes
    Genome Res. January 1, 2001 11: 152-162; doi:10.1101/gr.150201

  • High-Throughput SNP Genotyping by Allele-Specific PCR with Universal Energy-Transfer-Labeled Primers

    • Maxim V. Myakishev,
    • Yuri Khripin,
    • Stella Hu,
    • and Dean H. Hamer
    Genome Res. January 1, 2001 11: 163-169; doi:10.1101/gr.157901

RESOURCES

  • A SNP Resource for Human Chromosome 22: Extracting Dense Clusters of SNPs From the Genomic Sequence

    • Elisabeth Dawson,
    • Yuan Chen,
    • Sarah Hunt,
    • Luc J. Smink,
    • Adrienne Hunt,
    • Kate Rice,
    • Simon Livingston,
    • Suzannah Bumpstead,
    • Richard Bruskiewich,
    • Pak Sham,
    • Rocky Ganske,
    • Mark Adams,
    • Kazuhiko Kawasaki,
    • Nobuyoshi Shimizu,
    • Shinsei Minoshima,
    • Bruce Roe,
    • David Bentley,
    • and Ian Dunham
    Genome Res. January 1, 2001 11: 170-178; doi:10.1101/gr.156901

  • GBuilder—An Application for the Visualization and Integration of EST Cluster Data

    • Juha Muilu,
    • Patricia Rodriguez-Tomé,
    • and Alan Robinson
    Genome Res. January 1, 2001 11: 179-184; doi:10.1101/gr.157501
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This Issue

January 2001; 11 (1)
Cover
  1. INSIGHT/OUTLOOK
  2. REVIEW
  3. ARTICLE
  4. LETTERS
  5. METHODS
  6. RESOURCES

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