Rapid Detection of Deletion, Insertion, and Substitution Mutations via Heteroduplex Analysis Using Capillary- and Microchip-Based Electrophoresis

Table 1.

Primers Used for Heteroduplex Analysis

 Position Primers Ta Tm Size
 185delAG Forward: 5′GAAGTTGTCATTTTATAAACCTTT-3′ 53 56 258 bp
 (Exon 2, BRCA1) Reverse: 5′-TGTCTTTTCTTCCCTAGTATGT-3′ 53
Forward 1: 5′-TCCAACACTTGTTATTTGGT-3′ 53 56 159 bp
 E1250X Reverse 1: 5′-CCTTTGCCAATATTACCTG-3′ 53
 (Exon 11,BRCA1) Forward 2: 5′-TTTCACCCATACACATTTG-3′ 53 56 260 bp
Reverse 1: 5′-CCTTTGCCAATATTACCTG-3′ 53
 R1443G Forward: 5′-AGCTGTGTTAGAACAGCATG-3′ 54 56 204 bp
 (Exon 13,BRCA1) Reverse: 5′-TGTTGGAGCTAGGTCCTTAC-3′ 54
Forward 1: 5′-ATATGACGTGTCTGCTCCAC-3′ 56 58 257 bp
Reverse 1: 5′-AGTCTTACAAAATGAAGCGG-3′ 55
 5382insC Forward 1: 5′-ATATGACGTGTCTGCTCCAC-3′ 56 58 296 bp
 (Exon 20,BRCA1) Reverse 2: 5′-CCTGTGTGAAAGTATCTAGCAC-3′ 54
Forward 1: 5′-ATATGACGTGTCTGCTCCAC-3′ 56 58 399 bp
Reverse 3: 5′-GGGAATCCAAATTACACAGC-3′ 57
Forward 1: 5′-GTTGGACAGTGTAGCACTCTA-3′ 53 56 136 bp
 5677insA Reverse 1: 5′-CCACTTTGTAAGCTCATTCTT-3′ 54
 (Exon 24,BRCA1) Forward 2: 5′-ATGAATTGACACTAATCTCTGC-3′ 54 56 223 bp
Reverse 1: 5′-CCACTTTGTAAGCTCATTCTT-3′ 54
 6174delT Forward: 5′-CACCTTGTGATGTTAGTTTGGA-3′ 58 58 201 bp
 (Exon 11,BRCA2) Reverse: 5′-TGGAAAAGACTTGCTTGGTACT-3′ 58

This Article

  1. Genome Res. 10: 1403-1413

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