Detection of Spurious Interruptions of Protein-Coding Regions in Cloned cDNA Sequences by GeneMark Analysis

Table 4.

Observed Sequences at the Sites of Frame-Shift Mutations

Type occurrence revised sequence Cloned sequence Number
−1 frame-shift
 A7 A6 3
 A4 A3 2
 A5 A4 1
 G2 G1 2
 C4 C3 1
 C3 C2 1
 C2 C1 1
 T3 T2 1
 CGA CA 1
 TGT TT 1
 TAC TC 1
 GCT GT 1
−2 frame-shift
 ATAT AT 1
 CACA CA 1
 GAGAGA GAGA 1
 TATTG TTG 1
+1 frame-shift
 A8 A9 1
 A6 A7 2
 G2 G3 1
 C2 C3 1
 T7 T8 2
 GA GTA 1
+2 frame-shift
 A6 A8 1
 A7 A9 1

This Article

  1. Genome Res. 10: 1333-1341

Preprint Server