Molecular Cloning, Genomic Organization, Developmental Regulation, and a Knock-out Mutant of a Novel Leu-rich Repeats-containing G Protein-coupled Receptor (DLGR-2) from Drosophila melanogaster

Table 1.

Intron/Exon Boundaries of the DGLR-2 Gene

Intron 5′ Donor Intron size (bp) 3′ Acceptor Intron phase
1 (variant1) TTT gtaaggt....   ∼7 kb ....cccttag ACA
1 (variant2) AAG gtgccac....   ∼7 kb ....cccttag ACA
1 (variant3) TTG gtgccac....   ∼7 kb ....cccttag ACA
1 (variant4) TTT gtaaggt....   ∼7 kb ....taaatag ATA
2 CT  gtgagta.... 1223 bp ....ccaacag  A 2
Leu  Leu
3 CT  gtgagta....  583 bp ....tttgcag   A 2
Leu  Leu
4 CT  gtaagta....  325 bp ....cacacag  A 2
Leu  Leu
5 CT gtgagcc....  591 bp ....tcgacag   C 2
Leu  Leu
6 CT gtaagta....   74 bp ....tttgcag   T 2
Leu  Leu
7 TT gtaagta....  1747 bp ....tttgcag   A 2
Leu  Leu
8 CT gtaagta....  1083 bp ....ccttcag   T 2
Leu  Leu
9 CT gtgagta....  55 bp ....ttttcag   G 2
Leu  Leu
10 TT gtgagtt....  65 bp ....actgcag   A 2
Leu  Leu
11 TT gtaagtt....  57 bp ....cacccag   A 2
Leu  Leu
12 CT gtgcgtt....  61 bp ....ttcacag   T 2
Leu  Leu
13 C  gtaagtg....  56 bp ....tccccag  AT 1
His  His
14 G  gtaagtg....  57 bp ....tgtacag  CG 1
Ala  Ala
  • The sequence of each of the intron-exon boundaries is shown, as well as the codons for the amino acid residues. Uppercase and lowercase letters represent nucleotides in the exons and introns, respectively. For intron 1, the four splicing variants that we have isolated are given. These variants differ from each other, depending on which 5′ donor and 3′ acceptor sites are used. The sequences of the introns are given in our GenBank/EMBL Database submission. The overall positions of the introns are shown in Figs. 1 and 2. Introns 9-12 occur at the same positions within the gene and have the same intron phasing as four introns in the genes of the mammalian glycoprotein hormone receptors (• in Fig. 3).

This Article

  1. Genome Res. 10: 924-938

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