A Human Genomic Library Enriched in Transcriptionally Active Sequences (aDNA Library)

Table 2.

aDNA Library Clones that Displayed High Sequence Identity with cDNA or Genomic DNA (gDNA) of Previously Defined Gene Sequences

Clone I.D. Gene match Region of match Database entry Chromosomal location of match Gene type Multigene family
ALP10 BAT3 5′ upstream of CDS gDNA 6p21.3 HLA-B-type transcript 3, Class III MHC yes
ALP27 Utrophin 5′ to middle of CDS cDNA 6p24 Dystrophin related structural protein
ALP35 P0071 5′ upstream of CDS cDNA Armadillo junctional plaque protein yes
ALP74 FREAC4 5′ upstream of CDS gDNA/cDNA 5q12–13 Transcription regulator yes
ALP104 ZNF74 5′ upstream of CDS gDNA 22q11.2 Zinc finger RNA binding protein
ALP107 FK506 5′ upstream of CDS cDNA Papamycin binding protein yes
ALP112 CHL1 5′ upstream of CDS cDNA 12p13, p11 Putative helicase yes
ALP114 MET 5′ upstream of CDS gDNA 9q34 Unknown function no
ALP120 Immunoglobulin 5′ upstream of CDS gDNA 22q11.2 Immunoglobulin light chain yes
ALP129 STCH 5′ upstream of CDS gDNA 21p11.2 Microsomal stress 70 protein ATPase core yes
ALP140 QM 5′ upstream of CDS gDNA Xq28 Unspecified yes
ALP143 SelP 5′ upstream of CDS gDNA Selenoprotein P, unknown function
ALP157 WS bHLH 5′ upstream of CDS gDNA 7q11.23 Basic-helix-loop-helix leucine zipper yes
ALP159 Kinase A 3′ downstream of CDS cDNA 17; 394.1 cR from  pTEL Anchor protein yes
ALP162 KIAA0702 5′ upstream of CDS cDNA Unknown function
ALP168 MAD3 5′ upstream of CDS cDNA Transcriptional repressor yes
  • Gene name, type, and chromosomal location (if known) of the match are indicated, as is the location of high sequence identity within each gene. CDS denotes coding sequence. All but two matches were located within the 5′ region of each gene.

This Article

  1. Genome Res. 10: 874-886

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