Parallel Genotyping of Human SNPs Using Generic High-density Oligonucleotide Tag Arrays

Table 1.

Discrepancies Between Genotyping Calls with Gel-based Sequencing and the Array-based Method

SNP name WT allele Mutant allele Gel-based sequencing Array-based assay Discrepancies
904889 90896 904957 904889 904896 904957
ACEEX17.19 C A C/C A/A A/C C/C C/C C/C 2
CYP11B2EX6.91 T C T/C T/C T/C T/T T/T T/T 3
CYP11B2BX7.65 T C T/C C/C C/C T/T T/T T/T 3
GLUT4EX3.112 C G G/G G/G G/G C/C C/C C/C 3
GALNREX1.553 G C G/C G/G G/C G/G G/G G/G 2
ICAM1EX6.254 G A G/G G/G G/G A/A A/A A/A 3
GMP-140.25 T G G/G G/G G/G G/G T/G G/G 1

This Article

  1. Genome Res. 10: 853-860

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