The Complete Mitochondrial DNA Sequence of Scenedesmus obliquus Reflects an Intermediate Stage in the Evolution of the Green Algal Mitochondrial Genome

Table 2.

Comparison of Gene Content in Green Algal Mitochondrial Genomes

Gene Cre Ceu Cel Sob Pmi Pwi Nol
Complex I
 nad1 + + + + + + +
 nad2 + + + + + + +
 nad3 + + + +
 nad4 + + + + + + +
 nad4L + + + +
 nad5 + + + + + + +
 nad6 + + + + + + +
 nad7 + +
 nad8 +
 nad9 + +
Complex III (cob)
+ + + + + + +
Complex IV
 cox1 + + + + + + +
 cox2 + + +
 cox3 + + +
Complex V
 atp1 + +
 atp6 + + + +
 atp8 + + +
 atp9 + + +
Ribosomal RNAs
 rnl + (8) + (6) + (6) + (4) + (2) + (1) + (1)
 rns + (4) + (3) + (3) + (2) + (1) + (1) + (1)
 rrn5 + (1) + (1)
Transfer RNAs
 AA Anticodon Codon
 A(ugc)GCN + + +
 C(gca)UGY + + + +
 D(guc)GAY + + +
 E(uuc)GAR + + + +
 F(gaa)UUY + + + +
 G(gcc)GGY +
 G(ucc)GGN + + +
 H(gug)CAY + + + +
 I(gau)AUY + + +
I (uau)AUA +
 I(cau)AUA + +
 K(uuu)AAR + + +
L(cua)*UAG +
 L(uaa)UUR + +
 L(caa)UUG + +
 L(uag)CUN + +
L(aag)*CUN +
L(cag)*CUG +
 Me(cau)AUG + + + + + +
 Mf(cau)AUG + + +
 N(guu)AAY + + +
 P(ugg)CCN + + +
 Q(uug)CAR + + + + + + +
 R(acg)CGN + + +
 R(ucg)CGR +
 R(ucu)AGR + + +
R(ccu)*AGG +
 S(gcu)AGY + + +
 S(uga)UCN + +
S(gga)*UCY +
 T(ggu)ACY +
 T(ugu)ACN +
 V(uac)GUN + + +
 W(cca)UGG + + + + + +
 W(uca)UGR +
 Y(gua)UAY + + + +
  • See Table 1 for abbreviations of species names.

  • Numbers in parentheses indicate the number of coding modules for that particular rRNA species.

  • Mitochondrially-encoded tRNAs unique toScenedesmus are in bold and marked with an asterisk; the codons they read and the amino acids they specify are also set in bold.

  • Transfer RNA coded for by a duplicated gene.

This Article

  1. Genome Res. 10: 819-831

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