A High-throughput AFLP-based Method for Constructing Integrated Genetic and Physical Maps: Progress Toward a Sorghum Genome Map

Table 1.

Automated Contig Assembly of Sorghum bicolor Project

Contig Size No. of Contigs
5 × 10−14 10−10
≥25 7 30
10 to 24 135 191
3 to 9 1938 2058
2 1265 1087
Singletons 6701 2485
Total of contigs 3345 3366
  • Total clones = 22,233; tolerance = 7; bury ∼0.1, minimum bands = 8; average clone length = 39.7a

  • Average number of bands in a clone.

  • Total number of clones in a contig.

  • Average number of clones/contig = 4; average contig length = 58 bands.

  • Average number of clones/contig = 5; average contig = 62 bands.

This Article

  1. Genome Res. 10: 789-807

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