Tandem Clusters of Membrane Proteins in Complete Genome Sequences

Table 4.

Conserved Tandem Clusters with Unknown Functions

Cluster number Organism Conserved protein 1 TM Conserved protein 2 TM Conserved protein 3 TM Cluster size Note
1 Ec b2141 (+) 4 b2142 (+) 4 2
Hi HI1297 (+) 4 HI1298 (+) 5 2
Bs ywbH (+) 4 ywbG (+) 5 3
Bs ysbA (+) 5 ysbB (+) 3 2
2 Mj MJ1561 (−) 1 MJ1562 (−) 5 3
Af AF1230 (−) 1 AF1229 (−) 9 2
Ph PH0286 (−) 1 PH0287 (−) 13 2
3 Ec b3577 (+) 4 b3578 (+) 10 3
Hi HI1030 (−) 3 HI1029 (−) 13 2
Hi HI0051 (−) 4 HI0050 (−) 9 4
4 Mg MG225 (+) 10 MG226 (+) 11 2
Mp F10_orf491 (−) 10 F10_orf503 (−) 12 2
5 Mg Mg241 (+) 3 Mg242 (−) 2 3
Mp F10_orf621 (+) 3 F10_orf632o (−) 3 3
6 Mtu Rv0450c (−) 12 Rv0451c (−) 1 3 Protein 3 is long-
Mtu Rv0402c (−) 12 Rv0403c (−) 1 Rv0404 (+) 1 4  chain-fatty-acid CoA
Mtu Rv1522c (−) 12 Rv1521c (−) 3 6  ligase
Mtu Rv2942 (−) 12 Rv2941 (+) 2 2
7 Mtu Rv0283 (+) 1 Rv0284 (+) 1 2 Protein 2 is similar to
Mtu Rv1782 (+) 1 Rv1783 (+) 2 2  cell division proteins
Mtu Rv3869 (+) 1 Rv3870 (+) 3 3
Mtu Rv3895c (−) 2 Rv3894c (−) 2 2
8 Mtu Rv1796 (+) 2 Rv1795 (+) 9 Rv1797 (+) 1 3
Mtu Rv3886c (−) 2 Rv3887c (−) 11 Rv3885c (−) 1 3
Mtu Rv3876 (+) 1 Rv3877 (+) 11 2
  • The strand direction shown in parentheses.

  • The number of predicted transmembrane segments.

This Article

  1. Genome Res. 10: 731-743

Preprint Server