MHC Class II Pseudogene and Genomic Signature of a 32-kb Cosmid in the House Finch (Carpodacus mexicanus)

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Figure 6.
Figure 6.

Phylogenetic analysis of exon 2 (A) and exon 3 (B) sequences from different avian species (Lost=Bengalese finch, Vincek et al. 1995; Apco=scrub jay, Came=house finch, Agph=red-winged blackbird,Edwards et al. 1995a; HFcos10A=house finch cosmid 10A, HF=unresolved exon 3 sequences; Phco=ring-necked pheasant, Witzell et al. 1999; BLB=chicken, Zoorob et al. 1993). The trees shown are neighbor-joining trees (Saitou and Nei 1987) using a Tamura-Nei (1993) distance. The numbers above the branches are bootstrap scores with 1000 replicates. The trees are rooted with the pheasant and chicken sequences used collectively as an outgroup.

This Article

  1. Genome Res. 10: 613-623

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