HOBACGEN: Database System for Comparative Genomics in Bacteria

Table 3.

Number of Proteins, Genomic Sequences and CDSs from Completely Sequenced Genomes That Can Be Accessed in HOBACGEN Release 6

Species Number
prots. seqs. CDSs
Aeropyrum pernix 2698 15 2699
Aquifex aeolicus 1550 109 1522
Archaeoglobus fulgidus 2411 185 2419
Bacillus subtilis 4642 1093 9434
Borrelia burgdorferi 2218 821 1686
Chlamydia pneumoniae 1115 148 1104
Chlamydia trachomatis 1436 661 1432
Escherichia coli 8295 5021 16179
Haemophilus influenzae 1989 521 2140
Helicobacter pylori J99 1464 132 1491
Methanobacterium thermoautotrophicum 2071 239 2098
Methanococcus jannaschii 1771 155 1772
Mycobacterium tuberculosis 4089 742 4338
Mycoplasma genitalium 576 392 917
Mycoplasma pneumoniae 701 157 790
Pyrococcus horikoshii 2061 10 2065
Rickettsia prowazekii 847 529 920
Saccharomyces cerevisiae 6873 14702 12770
Synechocystissp. 3248 151 3378
Thermotoga maritima 1892 201 1979
Treponema pallidum 1077 179 1166
  • The number of CDSs often exceeds the number of proteins because of the redundancy in the EMBL database.

This Article

  1. Genome Res. 10: 379-385

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