A Fast and Scalable Radiation Hybrid Map Construction and Integration Strategy

Table 6.

Number of Markers that Are in the Same Order Between a Pair of Maps Out of the Number of Markers that Are Common Between Them

Chr Gnt vs. Int Gnt vs. GB4 Gnt vs. G3 G3 vs. GB4 Int. vs. GB4 Int vs. G3
 1 106/141 121/133 53/61 150/199 1149/2074 338/428
 2 65/83 55/58 64/75 98/136 817/1223 287/355
 3 90/106 65/66 68/81 96/132 815/1172 324/410
 4 43/52 67/68 22/22 74/99 549/877 444/517
 5 41/47 34/34 24/26 46/53 733/900 181/220
 6 79/98 123/127 29/33 72/89 825/1268 260/295
 7 62/78 49/49 53/63 78/102 530/803 236/295
 8 32/37 27/27 24/24 56/65 421/734 193/227
 9 34/38 24/25 27/28 57/77 444/640 161/210
10 57/65 54/59 33/37 73/96 649/925 219/268
11 49/58 41/41 42/45 79/102 788/1037 275/305
12 51/57 57/60 32/33 49/67 680/1038 213/236
13 26/33 35/35 18/19 33/34 247/436 119/141
14 29/35 30/30 23/23 54/66 463/707 185/211
15 22/31 29/30 16/17 37/53 378/639 108/159
16 34/40 34/35 28/28 32/38 370/519 137/150
17 25/29 26/26 14/14 46/62 487/782 139/153
18 26/28 26/27 16/16 31/43 184/326 109/140
19 19/24 25/25 12/12 25/43 381/591 136/147
20 46/55 44/50 19/20 41/46 378/582 123/133
21 17/22 17/18 11/13 16/20 156/228 99/113
22 9/12 15/17 7/9 16/20 147/251 78/82
23 32/37 42/46 12/16 22/28 383/528 68/112
 Total 994/1206 1040/1086 647/715 1281/1670 11974/18280 4432/5307
(82.42%) (95.76%) (90.49%) (76.71%) (65.50%) (83.51%)

  • (Chr) Chromosome number; (Gnt) Généthon map (Dib et al. 1996); (Int) our integrated map; (GB4) RH Consortium map (Deloukas et al. 1998); (G3) Stanford map (Stewart et al. 1997).

This Article

  1. Genome Res. 10: 350-364

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