Gene Discovery Using Computational and Microarray Analysis of Transcription in the Drosophila melanogaster Testis

Table 4.

Sequence Match Categories

Sequence match category Total testis ESTs Non-overlapping testis ESTs
nr protein BDGP EST GadFly predicted
+ + + 7% (231) 9% (139)
+ − + 2% (53) 2% (30)
+ + − <<1% (1) <<1% (1)
+ − − <<1% (1) <<1% (1)
− + + 46% (1443) 41% (641)
− − + 29% (909) 33% (511)
− + − 4% (139) 3% (42)
− − − 12% (364) 13% (195)

  • ↵BLASTX sequence match (E-value <1E-20 and >90% sequence identity) with GenBank non-redundant protein.

  • ↵BLASTN sequence match (E-value <1E-20) with BDGP EST.

  • ↵BLASTN sequence match (E-value <1E-20) with BDGP/CG GadFly predicted gene.

This Article

  1. Genome Res. 10: 2030-2043

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