A Random Sequencing Approach for the Analysis of the Trypanosoma cruzi Genome: General Structure, Large Gene and Repetitive DNA Families, and Gene Discovery

Table 1.

BLASTX Matches to Nonredundant Databases

No. of GSS % of GSS No. ESTs % of ESTs
Total 11,459 100 8,796 100
Database matches:
Total 3,724 32.5 2,552 29
T. cruzi 2,778 24.2 861 9.8
Other trypanosomatids 331 2.9 262 3
Other organisms 616 5.4 1,429 16.2
No database match 7,735 67.5 6,244 71

  • All of the GSSs presented in this paper and all the T. cruzi ESTs present in the dbEST division of GenBank were used to search the NCBI nonredundant database (GenBank Release 115). Matches with an E value ≤ 1e-5 were considered positive.

This Article

  1. Published in Advance November 21, 2000, doi: 10.1101/gr.146300 Genome Res. 10: 1996-2005

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