Phylogeny of the Serpin Superfamily: Implications of Patterns of Amino Acid Conservation for Structure and Function

Table 1.

Role of Members of the Serpin Superfamily

Serpin Abbreviation Role Primary function/target References Species
α1-Antichymotrypsin ACT In chymotrypsin a M
α1-Antitrypsin AAT In elastase b M/Am
α2-Antiplasmin A2AP In plasmin c M
Accessory gland protein Acp76A O reproductive system d dme
Angiotensinogen ANGT O non-inhibitory, hormone precursor e,f M
Antithrombin ANT In/O thrombin, factor Xa, anti-angiogenesis g,h M/F
Blood fluke serpins Ac N inhibitory RCL, target unknown.Schistosoma haematobium major antigen i sma/ja/ha
Bomapin Bomapin In inhibitory activity vs serine proteinases j hsa
Bombyx moriserpins Ac In, N inhibitory activity vs serine proteinases k bmo
C1 inhibitor C1-I In complement C1 esterase l M
Corticosteroid-binding globulin CBG O non-inhibitory, hormone binding m M/Am
Factor Xa–directed anticoagulant Ac In reversible noncovalent factor Xa inhibition n aae
Glia-derived nexin GDN O/In neurite outgrowth, thrombin o M
Heat shock protein 47 HSP47 O chaperone, folding, collagen processing p M/F
Heparin cofactor II HEPII In thrombin/chymotrypsin q,r M/Am
Kallistatin KAL In tissue kallikrein s M
Limulus intracellular coagulation inhibitor LICI In factor C, limulus clotting enzyme, other serine proteases t ttr
Manduca sextaalaserpin (12 splice variants) SERP-1 In, N some show inhibitory activity vs serine proteinases u mse
Maspin Maspin In tissue-type plasminogen activator/prevents metastasis v,w M
Monocyte/neutrophil elastase inhibitor MNEI In proteinase 3, cathepsin G x M
Myeloid and erythroid nuclear-termination stage specific protein MENT O chromatin condensation y gga
Nematode Ac N many with inhibitory RCL, targets unknown z cel
Neuroserpin NEUS In plasminogen activator, urokinase, plasmin aa M
Ovalbumin OVAL N non-inhibitory bb,cc A
PI6 PI6 In cathepsin G dd M
PI8 PI8 In trypsin-like proteinases ee,ff hsa
PI9 PI9 In granzyme B gg M
Pigment epithelium-derived factor PEDF O neurotrophic factor hh M
Plant serpins (e.g., protein Z) Ac In inhibitory activity vs serine proteinase, target unknown ii,jj P
Plasminogen Activator Inhibitor-1 PAI-1 In tissue-type plasminogen activator kk M
Plasminogen Activator Inhibitor-2 PAI-2 In tissue-type plasminogen activator, intracellular signaling ll,mm M
Protein C Inhibitor PCI In protein C nn M
Regeneration-Associated Protein RASP-1 In liver regeneration, human homolog protein Z potent FXa inhibitor oo rno
Sea lamprey serpin Ac N inhibitory RCL, target unknown pp pma
Signal crayfish Ac N inhibitory RCL, target-unknown qq ple
Squamous Cell Carcinoma Antigen-1 SCCA-1 In inhibitory activity vs papain-like cysteine proteases rr hsa
Squamous Cell Carcinoma Antigen-2 SCCA-2 In inhibitory activity vs serine proteinases ss M
Thyroxine-binding globulin TBG O non-inhibitory, hormone binding tt M/Am
TP55 Megsin O megakaryocyte maturation uu hsa
Uterine milk protein UTMP In/O activin binding, inhibitory activity vs aspartic proteases vv,ww M
Viral serpin CrmA CrmA In interleukin-converting enzyme 1β xx V
  • (Ac) Identified by its individual accession.

  • (In) Protease inhibitor; (O) other function; (N) not known.

  • Where sequences are present in more than one species, the class is given. (A) avian; (Am) amphibian; (F) fish; (M) mammalian; (P) plant; (V) viral. Italicized labels refer to individual species: (aae) Aedes aegypti; (bmo)Bombyx mori; (cel) Caenorhabditis elegans; (dme) Drosophila melanogaster;(gga) Gallus gallus; (hsa) Homo sapiens; (mse) Manduca sexta;(ple) Pacifastacus leniusculus; (pma)Petromyzon marinus; (rno) Rattus norvegicus; (sma/ja/ha). Schistosoma mansoni, Schistosoma japonicum, Schistosoma haematobium; (ttr)Tachypleus tridentatus.

  • Kalsheker 1996 (review); b Patterson 1991 (review);c Holmes et al. 1987; d Wolfner et al. 1997;e Stein et al. 1989; f Arakawa et al. 1965;g O'Reilly et al. 1999; h Lane et al. 1992 (review);i Blanton et al. 1994; j Riewald and Schleef 1995;k Sasaki 1991; l Zeerleder et al. 1999 (review);m Pemberton et al. 1988; n Stark and James 1998;o Zurn et al. 1988; p Nakai et al. 1992;q Tollefsen et al. 1982; r Church et al. 1985;s Wang et al. 1989; t Miura et al. 1994;u Jiang and Kanost 1997; v Sheng et al. 1998;w Zou et al. 1994; x Sugimori et al. 1995;y Grigoryev et al. 1992; z Whisstock et al. 1999;aa Krueger et al. 1997; bb Wright 1984;cc Stein et al. 1989; dd Scott et al. 1999a;ee Sprecher et al. 1995; ff Dahlen et al. 1998;gg Bird et al. 1998; hh Steele et al. 1993;ii Lundgard and Svensson 1989; jj Rasmussen et al. 1996; kk Reilly et al. 1994 (review); ll Dickinson et al. 1998; mm Astedt et al. 1998 (review); nn Suzuki et al. 1983; oo New et al. 1996; pp Robson et al. 1998; qq Liang and Soderhall 1995; rr Schick et al. 1998; ss Schick et al. 1998; tt Pemberton et al. 1988; uu Tsujimoto et al. 1997; vv McFarlane et al. 1999; ww Mathialagan and Hansen 1996; xx Ray et al. 1992.

This Article

  1. Genome Res. 10: 1845-1864

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