Table 3.
Misclassified Genes
| Cases in class I classified in class III | |
| MITF (AF034755) | quiescin (Q6): bone-derived growth factor (L42379) |
| BTF3 (X74070) | c-fms proto-oncogene (X03663) |
| ZNF143 (U09850) | CDKN3: CD11/KAP (L25876) |
| STAT4 (L78440) | AREB6 (D15050) |
| TFIIIC α-chain (AC002551) | PDGF platelet-derived growth-factor receptor β-like tumor suppressor (D37965) |
| GOS24 (M92844) | TGF-β superfamily protein (AB000584) |
| HIC-1 (zinc finger TF) (L41919) | hepatocyte growth factor-like protein (U37055) |
| Stat2 (U18671) | |
| Cases in class III classified in class I | |
| Immunoglobulin κ light chain, subclass II, A3 gene (X12690) ΔG AUG | TBG: thyroxin-binding globulin (Z83850) ΔG AUG |
| Myosin VIIA (Usher syndrome 1B (autosomal recessive, severe) (U39226) ΔG | immunoglobulin from VH4 family (from a patient with X-linked agammaglobulinemia) (X56158) TOP AUG |
| Myosin I beta (X98507) ΔG | histone H3.3 (Z48950) ΔG |
| A2M: α2-macroglobulin (Z11711) ΔG AUG | fructose–bisphosphatase, aldolase A (D28356) ΔG |
| HBQ1: hemoglobin, θ1 (M91453) ΔG | myosin regulatory light chain (U26162) ΔG |
| Cases in classes I & III classified in class II | |
| Mammaglobin (AF015224) | Phosphogluconate dehydrogenase (U30255) |
| QM-tumor suppressor gene (U37218) | |
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(ΔG) Presence of stable secondary structure; (AUG) presence of uAUGs; (TOP) presence of 5′ TOP.
