Table 3.
Global Sequence Comparison of Human 11p15 and the Orthologous Mouse Domain
| Feature | Mouse | Human |
| Total sequence | 915699 bp | 900050 bp |
| Known genes | 16 | 16 |
| Exons | 112 | 119 |
| Content | 28710 bp | 27890 bp |
| Novel transcripts | 6 | 7 |
| GC content | 47.76% | 54.70% |
| CpG islands | 65 | 119 |
| Conserved CpG islands | 33 | 33 |
| Conserved content | 17600 bp | 17600 bp |
| Conserved nonexonic, nonisland sequences | 49 | 49 |
| Conserved content | 10007 bp | 10007 bp |
| Total interspersed repeats | 219 kb (23.96%) | 264 kb (29.38%) |
| SINEs | 367 (5.24%) | 215 (5.25%) |
| LINEs | 114 (8.08%) | 192 (16.37%) |
| LTR elements | 170 (7.68%) | 104 (6.37%) |
| MERs, Mariners | 20 (0.41%) | 53 (1.4%) |
| Total simple repeats | 294 (2.07%) | 153 (1.92%) |
| Small RNA repeats | 3 (0.02%) | 2 (0.02%) |
| Low complexity repeats | 69 (0.48%) | 63 (0.54%) |
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The percent of conserved sequence (4.2%) is calculated by dividing the sum of the conserved CpG island content and non-exonic non-island content, by the aligned mouse sequence excluding the human sequence not yet completed.
